RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 TFF2Q03403 129 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TRDNQ13061 729 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF268Q14587 947 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PTPAQ15257 358 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CCDC85BQ15834 202 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 DEFB128Q7Z7B8 93 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KREMEN2Q8NCW0 462 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 NCOA7Q8NI08 942 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 RNF217Q8TC41 542 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ELSPBP1Q96BH3 223 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MAP7D2Q96T17 732 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TMX1Q9H3N1 280 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 IGFLR1Q9H665 355 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SEC63Q9UGP8 760 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ADAMTS1Q9UHI8 967 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 EVLQ9UI08 416 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 STK36Q9NRP7 1315 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 A0A1W2PNR3 127 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CHURC1-FNTBB4DL54 471 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KLRF2D3W0D1 207 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 H0Y626 953 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MEIS2O14770 477 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PEX10O60683 326 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TRIM16O95361 564 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CDK4P11802 303 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 DARSP14868 501 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MYOGP15173 224 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ATF4P18848 351 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CSRP1P21291 193 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CES1P23141 567 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CCR3P51677 355 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TYRO3Q06418 890 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 DSC1Q08554 894 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 HTR4Q13639 388 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CSRP2Q16527 193 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CCDC149Q6ZUS6 474 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TMTC3Q6ZXV5 915 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KCTD1Q719H9 257 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MB21D2Q8IYB1 491 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KLHL23Q8NBE8 558 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CTCFLQ8NI51 663 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 C2orf15Q8WU43 125 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SLC5A5Q92911 643 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ZC3H10Q96K80 434 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM20AQ96MK3 541 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 AGXT2Q9BYV1 514 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 GCOM2Q9BZD3 368 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 RWDD1Q9H446 243 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 RNPEPQ9H4A4 650 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KIF9Q9HAQ2 790 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 BRD7Q9NPI1 651 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 METTL5Q9NRN9 209 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CHST7Q9NS84 486 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 STX8Q9UNK0 236 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 EFR3BQ9Y2G0 817 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ASB3Q9Y575 518 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MORC2Q9Y6X9 1032 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ANK1P16157 1881 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PDCD11Q14690 1871 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CYP2D7A0A087X1C5 515 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 WDR64B1ANS9 1081 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SH2B2O14492 632 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF197O14709 1029 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CAPN5O15484 640 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 RANBP6O60518 1105 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CDC45O75419 566 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 RPS6KA5O75582 802 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PROS1P07225 676 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ADRB1P08588 477 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SP9P0CG40 484 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 GNA11P29992 359 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 GBP2P32456 591 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TCF7P36402 384 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 NASPP49321 788 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ARSDP51689 593 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CLCN4P51793 760 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SFSWAPQ12872 951 aaKnown RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 MTMR1Q13613 665 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 LY6KQ17RY6 165 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CEP55Q53EZ4 464 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 XKR3Q5GH77 459 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ANO1Q5XXA6 986 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TPGS2Q68CL5 300 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 LILRA6Q6PI73 481 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 KCNT2Q6UVM3 1135 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 DGLUCYQ7Z3D6 616 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF280BQ86YH2 543 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TBC1D10CQ8IV04 446 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF654Q8IZM8 581 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 TMEM105Q8N8V8 129 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SUMF1Q8NBK3 374 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PJA1Q8NG27 643 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 SNX29Q8TEQ0 813 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 ANAPC16Q96DE5 110 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 WBP1Q96G27 269 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 IGSF21Q96ID5 467 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 CEP89Q96ST8 783 aa3.06□□□□□ -1.92
DEPDC1-203ENST00000488146 PCYT2Q99447 389 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms