RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ATP6V1DQ9Y5K8 247 aa25.9■■□□□ 1.74
RHBDD3-205ENST00000488106 POLR2DO15514 142 aaKnown RBP25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 GTF2BQ00403 316 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 MCL1Q07820 350 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 LLGL2Q6P1M3 1020 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 MAP4K3Q8IVH8 894 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 MRPL43Q8N983 215 aaKnown RBP25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 VN1R2Q8NFZ6 395 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 HASPINQ8TF76 798 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 SNX27Q96L92 541 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 CDCA3Q99618 268 aaPredicted RBP25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 CUEDC2Q9H467 287 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 SEL1LQ9UBV2 794 aa25.89■■□□□ 1.74
RHBDD3-205ENST00000488106 ABCD1P33897 745 aa25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 HSP90AA2PQ14568 343 aaPredicted RBP25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 PTPN14Q15678 1187 aa25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 NAB2Q15742 525 aa25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 PTCRAQ6ISU1 281 aaPredicted RBP25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 TMEM87AQ8NBN3 555 aa25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 NECAB3Q96P71 396 aaPredicted RBP25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 HERC2P3Q9BVR0 1158 aa25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 PANK4Q9NVE7 773 aa25.88■■□□□ 1.73
RHBDD3-205ENST00000488106 FSD2A1L4K1 749 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 C2CD2LO14523 706 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 PIGRP01833 764 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 SOD2P04179 222 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 TPRNQ4KMQ1 711 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 HERC4Q5GLZ8 1057 aaPredicted RBP25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 PPP1R10Q96QC0 940 aaKnown RBP25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 ST6GALNAC4Q9H4F1 302 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 KBTBD4Q9NVX7 518 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 STK39Q9UEW8 545 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 ADAM28Q9UKQ2 775 aa25.87■■□□□ 1.73
RHBDD3-205ENST00000488106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 SMIM28A0A1B0GU29 152 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 TISP43B9A030 160 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 KIF4AO95239 1232 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 GCNT3O95395 438 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 URODP06132 367 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 IL9P15248 144 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 FUT10Q6P4F1 479 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 SLC39A4Q6P5W5 647 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 TAS1R1Q7RTX1 841 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 ZNF720Q7Z2F6 126 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 B3GALT6Q96L58 329 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 UHRF1Q96T88 793 aaPredicted RBP25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 LRRC27Q9C0I9 530 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 GOLGA2P5Q9HBQ8 144 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 CLEC1BQ9P126 229 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 CD207Q9UJ71 328 aa25.86■■□□□ 1.73
RHBDD3-205ENST00000488106 FRMD3A2A2Y4 597 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 MEFVO15553 781 aaPredicted RBP25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 CLASP2O75122 1294 aaKnown RBP25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 TADA2AO75478 443 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 CXCL8P10145 99 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 MYBP10242 640 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 TNFSF9P41273 254 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 GLUD2P49448 558 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 CASP5P51878 434 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 ASIC1P78348 528 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 COASYQ13057 564 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 CCDC65Q8IXS2 484 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 HVCN1Q96D96 273 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 MSTO1Q9BUK6 570 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 FGFBP2Q9BYJ0 223 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 GPR62Q9BZJ7 368 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 TRIM9Q9C026 710 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 IKZF4Q9H2S9 585 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 OLFML3Q9NRN5 406 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 MRPL17Q9NRX2 175 aaKnown RBP25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 KCNH3Q9ULD8 1083 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 IRAK3Q9Y616 596 aa25.85■■□□□ 1.73
RHBDD3-205ENST00000488106 ANKRD63C9JTQ0 380 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 PPP1R37O75864 691 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 SRGAP2BP0DMP2 458 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 SCN1AP35498 2009 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 AMPD3Q01432 767 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 ZBTB41Q5SVQ8 909 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 ALKAL1Q6UXT8 129 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 RNF168Q8IYW5 571 aaPredicted RBP25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 MSLNLQ96KJ4 702 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 ZMAT2Q96NC0 199 aaKnown RBP25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 MAGEF1Q9HAY2 307 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 CNTN3Q9P232 1028 aa25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 SF3B1O75533 1304 aaKnown RBP eCLIP25.84■■□□□ 1.73
RHBDD3-205ENST00000488106 A0A1B0GVL5 298 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 GRXCR2A6NFK2 248 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 OGTO15294 1046 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 EFEMP2O95967 443 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 PFKFB1P16118 471 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 CASP1P29466 404 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 SOX4Q06945 474 aaPredicted RBP25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 KCNA1Q09470 495 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 SLC10A6Q3KNW5 377 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 XKR4Q5GH76 650 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 HPS3Q969F9 1004 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 SCAND2PQ9GZW5 306 aaPredicted RBP25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 GDPD2Q9HCC8 539 aa25.83■■□□□ 1.73
RHBDD3-205ENST00000488106 HCFC2Q9Y5Z7 792 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms