RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GOLGA6CA6NDK9 693 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 GOLGA6BA6NDN3 693 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 TEX33O43247 280 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 SNRPA1P09661 255 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 GOLGA6DP0CG33 693 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 HK1P19367 917 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 PCSK1P29120 753 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 HIBADHP31937 336 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 ALDH1A3P47895 512 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 FXR1P51114 621 aaKnown RBP eCLIP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 RAP2BP61225 183 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 CREMQ03060 361 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 TARDBPQ13148 414 aaKnown RBP eCLIP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 RAB39AQ14964 217 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 MINDY4Q4G0A6 757 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 HSP90AB2PQ58FF8 381 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 THEMIS2Q5TEJ8 643 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 CCDC181Q5TID7 509 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 ANKS6Q68DC2 871 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 NXNQ6DKJ4 435 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 EPM2AIP1Q7L775 607 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 PRR18Q8N4B5 295 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 ZNF808Q8N4W9 903 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 CAMKK1Q8N5S9 505 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 ATXN2LQ8WWM7 1075 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 CASKIN2Q8WXE0 1202 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 HPS3Q969F9 1004 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 C8orf49Q96NF6 230 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 ADOQ96SZ5 270 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 MRI1Q9BV20 369 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 GOLGA6AQ9NYA3 693 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 HECAQ9UBI9 543 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 CNOT11Q9UKZ1 510 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 PCDHB1Q9Y5F3 818 aa4.97□□□□□ -1.61
ECHDC1-217ENST00000488087 CXorf49A8MYA2 514 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 CYP27B1O15528 508 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 FTLP02792 175 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 ATP5JP18859 108 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 LPOP22079 712 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 SELENOPP49908 381 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 CRHR2Q13324 411 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 MTM1Q13496 603 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 ATAT1Q5SQI0 421 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 DOK3Q7L591 496 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 MDGA1Q8NFP4 955 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 SLC35B2Q8TB61 432 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 NSUN6Q8TEA1 469 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 TFAP2CQ92754 450 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 RGMAQ96B86 450 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 PGBD4Q96DM1 585 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 CCDC136Q96JN2 1154 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 LSM14BQ9BX40 385 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 CHMP4AQ9BY43 222 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 SLC12A5Q9H2X9 1139 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 CD248Q9HCU0 757 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 KMT5AQ9NQR1 393 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 ANLNQ9NQW6 1124 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 MAN1C1Q9NR34 630 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 POGKQ9P215 609 aa4.96□□□□□ -1.62
ECHDC1-217ENST00000488087 ATRNL1Q5VV63 1379 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 TBKBP1A7MCY6 615 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 WNT10BO00744 389 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 CTNND1O60716 968 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 CLRN1P58418 232 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 ZNF280AP59817 542 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 DSC2Q02487 901 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 PRKD1Q15139 912 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 GFOD2Q3B7J2 385 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 KHDC1Q4VXA5 237 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 ARHGAP29Q52LW3 1261 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 SPTY2D1Q68D10 685 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 EFCAB12Q6NXP0 572 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 ZNF529Q6P280 563 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 C14orf80Q86SX3 495 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 PALM2Q8IXS6 379 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 TTC9BQ8N6N2 239 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 RNF169Q8NCN4 708 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 C3orf20Q8ND61 904 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 ZFP28Q8NHY6 868 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 SLC35G2Q8TBE7 412 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 IFI44Q8TCB0 444 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 DIS3LQ8TF46 1054 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 C1GALT1C1Q96EU7 318 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 WWC2-AS2Q96NR7 200 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 MYOCQ99972 504 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 VRK1Q99986 396 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 GPR87Q9BY21 358 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 KCNH6Q9H252 994 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 CALCOCO1Q9P1Z2 691 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 CLCA2Q9UQC9 943 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 POLHQ9Y253 713 aa4.95□□□□□ -1.62
ECHDC1-217ENST00000488087 LRRC14BA6NHZ5 514 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 VSTM5A8MXK1 200 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 KIAA0391O15091 583 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 MUSKO15146 869 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 SLC16A6O15403 523 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 PJA2O43164 708 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 MYBP10242 640 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 SMARCA1P28370 1054 aa4.94□□□□□ -1.62
ECHDC1-217ENST00000488087 MAN2A2P49641 1150 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms