RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ROM1Q03395 351 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 DUSP8Q13202 625 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 NOGQ13253 232 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 ZNF174Q15697 407 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 E2F7Q96AV8 911 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 LAMB4A4D0S4 1761 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 UBA6A0AVT1 1052 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-217ENST00000487825 CBX4O00257 560 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 SERPINB2P05120 415 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 TACR2P21452 398 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 STAT3P40763 770 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 HGFACQ04756 655 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 FOXL1Q12952 345 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 ACAP1Q15027 740 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 SLFN12LQ6IEE8 588 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 Q6ZSN1 163 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 HDGFL2Q7Z4V5 671 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-217ENST00000487825 POLNQ7Z5Q5 900 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 GPR135Q8IZ08 494 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 SLC16A11Q8NCK7 471 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 TMEM176AQ96HP8 235 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 RNPC3Q96LT9 517 aaKnown RBP6.27□□□□□ -1.41
BRCA1-217ENST00000487825 TUBGCP5Q96RT8 1024 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 ZNF747Q9BV97 191 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 SAE1Q9UBE0 346 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-217ENST00000487825 B4GALT6Q9UBX8 382 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 SLC30A1Q9Y6M5 507 aa6.27□□□□□ -1.41
BRCA1-217ENST00000487825 FZD9O00144 591 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 SLC26A4O43511 780 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 RFPL3O75679 317 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 CYP17A1P05093 508 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 PHKG2P15735 406 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 MSX2P35548 267 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 RPS19P39019 145 aaKnown RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 ANTXR2P58335 489 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 ATP2C1P98194 919 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 NRN1LQ496H8 165 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 PRAMEF9Q5VWM5 478 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 CRIP3Q6Q6R5 217 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 GPC2Q8N158 579 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 Q8N1X5 172 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 SHCBP1Q8NEM2 672 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 ZNF622Q969S3 477 aaKnown RBP eCLIP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 MAML3Q96JK9 1138 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 ELF4Q99607 663 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 AGO3Q9H9G7 860 aaKnown RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 PLA2G3Q9NZ20 509 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 MAGEC2Q9UBF1 373 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-217ENST00000487825 FLT4P35916 1363 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 KIF24Q5T7B8 1368 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 TONSLQ96HA7 1378 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 COL4A5P29400 1685 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 UBR2Q8IWV8 1755 aa6.26□□□□□ -1.41
BRCA1-217ENST00000487825 SOS1Q07889 1333 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 MAFO75444 373 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 CELF2O95319 508 aaKnown RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 NEK4P51957 841 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 GRM7Q14831 915 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 RRS1Q15050 365 aaKnown RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 USP39Q53GS9 565 aaKnown RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 TTC38Q5R3I4 469 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 KLHDC10Q6PID8 442 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 ZNF808Q8N4W9 903 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 OR5AN1Q8NGI8 311 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 EDAQ92838 391 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 EXTL1Q92935 676 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 COG3Q96JB2 828 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 C16orf92Q96LL3 132 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 ZNF341Q9BYN7 854 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 DENND2AQ9ULE3 1009 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 CTDP1Q9Y5B0 961 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-217ENST00000487825 COL15A1P39059 1388 aa6.25□□□□□ -1.41
BRCA1-217ENST00000487825 SPTBN5Q9NRC6 3674 aaKnown RBP6.24□□□□□ -1.41
BRCA1-217ENST00000487825 KPNA6O60684 536 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 APOL3O95236 402 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 TCEA2Q15560 299 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 DGKDQ16760 1214 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 TKFCQ3LXA3 575 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 HSP90AB2PQ58FF8 381 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 USP50Q70EL3 339 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-217ENST00000487825 HOMER1Q86YM7 354 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 FAM89AQ96GI7 184 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 BRIP1Q9BX63 1249 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 NELFAQ9H3P2 528 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 TOMM22Q9NS69 142 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 FANCLQ9NW38 375 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 OXSMQ9NWU1 459 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 RNF186Q9NXI6 227 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 H2AFY2Q9P0M6 372 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-217ENST00000487825 NARFQ9UHQ1 456 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 ZKSCAN5Q9Y2L8 839 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 VWA7Q9Y334 891 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 RBM8AQ9Y5S9 174 aaKnown RBP6.24□□□□□ -1.41
BRCA1-217ENST00000487825 SNED1Q8TER0 1413 aa6.24□□□□□ -1.41
BRCA1-217ENST00000487825 ERVV-2B6SEH9 535 aa6.23□□□□□ -1.41
BRCA1-217ENST00000487825 H2AFYO75367 372 aaKnown RBP6.23□□□□□ -1.41
BRCA1-217ENST00000487825 ATP2A2P16615 1042 aaKnown RBP6.23□□□□□ -1.41
BRCA1-217ENST00000487825 GDF5P43026 501 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms