RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 TMEM31Q5JXX7 168 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 RARS2Q5T160 578 aaKnown RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 MPZL3Q6UWV2 235 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 ALKAL1Q6UXT8 129 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 HAUS6Q7Z4H7 955 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 GPR65Q8IYL9 337 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 MYCT1Q8N699 235 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 LARP4BQ92615 738 aaKnown RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 KCNN1Q92952 543 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 FBXL18Q96ME1 805 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 NECTIN4Q96NY8 510 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 PPP1R10Q96QC0 940 aaKnown RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 LRFN3Q9BTN0 628 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 CCDC94Q9BW85 323 aaPredicted RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 TOPORSQ9NS56 1045 aaPredicted RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
SPEN-205ENST00000487496 MORC2Q9Y6X9 1032 aaPredicted RBP12.55□□□□□ -0.4
SPEN-205ENST00000487496 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.44e-9■■■■■ 34.5
SPEN-205ENST00000487496 SMIM28A0A1B0GU29 152 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 FAM86C2PA6NEL3 165 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 H0YCG3 227 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 FAM13AO94988 1023 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
SPEN-205ENST00000487496 ADH1AP07327 375 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
SPEN-205ENST00000487496 RTP2Q5QGT7 225 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 FAM171A1Q5VUB5 890 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 FEZF2Q8TBJ5 459 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
SPEN-205ENST00000487496 RIPOR3Q96MK2 946 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 ACAP3Q96P50 834 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 POMKQ9H5K3 350 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 SFXN1Q9H9B4 322 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 PARVGQ9HBI0 331 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPEN-205ENST00000487496 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
SPEN-205ENST00000487496 CLDN3O15551 220 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 MEFVO15553 781 aaPredicted RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 TRAK2O60296 914 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 TBCAO75347 108 aaKnown RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 B3GAT3O94766 335 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 MTHFRP42898 656 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 NASPP49321 788 aaPredicted RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 CLCNKBP51801 687 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 MCL1Q07820 350 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPEN-205ENST00000487496 UPP1Q16831 310 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 GPR149Q86SP6 731 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 SNX27Q96L92 541 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
SPEN-205ENST00000487496 FIZ1Q96SL8 496 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 TTPALQ9BTX7 342 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 HAPLN2Q9GZV7 340 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 FNIP2Q9P278 1114 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 STK17AQ9UEE5 414 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 TBX20Q9UMR3 447 aa12.53□□□□□ -0.4
SPEN-205ENST00000487496 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 K7ENM7 598 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 GLUD1P00367 558 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 C1RP00736 705 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 SPATA31D3P0C874 917 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 KCNE1P15382 129 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 RPL17P18621 184 aaKnown RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 COL9A1P20849 921 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 SCP2P22307 547 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 TXLNAP40222 546 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 SOX4Q06945 474 aaPredicted RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 ELAVL2Q12926 359 aaKnown RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 SEZ6Q53EL9 994 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 PRSS55Q6UWB4 352 aaPredicted RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 CD300LGQ6UXG3 332 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 CEP57Q86XR8 500 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 PALB2Q86YC2 1186 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 PIK3R5Q8WYR1 880 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 BICD1Q96G01 975 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 UROC1Q96N76 676 aa12.52□□□□□ -0.41
SPEN-205ENST00000487496 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.41
SPEN-205ENST00000487496 GOLGA2P5Q9HBQ8 144 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms