RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 PRSS33Q8NF86 280 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 PIK3R5Q8WYR1 880 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 UROC1Q96N76 676 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 ACO2Q99798 780 aaKnown RBP13.67□□□□□ -0.22
SREBF1-215ENST00000487401 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
SREBF1-215ENST00000487401 PRKD2Q9BZL6 878 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 CXCL16Q9H2A7 254 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 MFSD1Q9H3U5 465 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 SMOC2Q9H3U7 446 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 C17orf75Q9HAS0 396 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 TOPORSQ9NS56 1045 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-215ENST00000487401 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
SREBF1-215ENST00000487401 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-215ENST00000487401 CLUHO75153 1309 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 SFI1A8K8P3 1242 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 PDGFBP01127 241 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 GUCY2CP25092 1073 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 GRM5P41594 1212 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 OSTNP61366 133 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 STRN3Q13033 797 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 NAB2Q15742 525 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 ZNF568Q3ZCX4 644 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 GLRA4Q5JXX5 417 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 LIN9Q5TKA1 542 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 ARL6IP4Q66PJ3 421 aaKnown RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 KCNK18Q7Z418 384 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 DAW1Q8N136 415 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 KCTD17Q8N5Z5 321 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 LNX1Q8TBB1 728 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 PLIN2Q99541 437 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
SREBF1-215ENST00000487401 IRF2BPLQ9H1B7 796 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 KCNK12Q9HB15 430 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 IGSF9Q9P2J2 1179 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 ARHGAP28Q9P2N2 729 aa13.66□□□□□ -0.22
SREBF1-215ENST00000487401 SMIM28A0A1B0GU29 152 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 SLC16A4O15374 487 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 ZMYND10O75800 440 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
SREBF1-215ENST00000487401 PLA2G4BP0C869 781 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 MCF2P10911 925 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
SREBF1-215ENST00000487401 MRE11P49959 708 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 NUBP1P53384 320 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 HYIQ5T013 277 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 SYT2Q8N9I0 419 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-215ENST00000487401 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
SREBF1-215ENST00000487401 ACAP3Q96P50 834 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 PNMA5Q96PV4 448 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 NTPCRQ9BSD7 190 aaKnown RBP13.65□□□□□ -0.22
SREBF1-215ENST00000487401 CDT1Q9H211 546 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.22
SREBF1-215ENST00000487401 FBXL21Q9UKT6 434 aa13.65□□□□□ -0.22
SREBF1-215ENST00000487401 TMEM189-UBE2V1I3L0A0 370 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
SREBF1-215ENST00000487401 PLS3P13797 630 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 CLCNKBP51801 687 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 TCF15Q12870 199 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 MAPK7Q13164 816 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 PPM1LQ5SGD2 360 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-215ENST00000487401 MPZL3Q6UWV2 235 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 TAS1R3Q7RTX0 852 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 AK8Q96MA6 479 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 MYADMQ96S97 322 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 KCND2Q9NZV8 630 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 EPS15L1Q9UBC2 864 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 FBXW11Q9UKB1 542 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 TRIOO75962 3097 aa13.64□□□□□ -0.23
SREBF1-215ENST00000487401 H0YCG3 227 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 SLC26A4O43511 780 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 N4BP1O75113 896 aaKnown RBP13.63□□□□□ -0.23
SREBF1-215ENST00000487401 XYLBO75191 536 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 PAPLNO95428 1278 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 BMP15O95972 392 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 FGFR3P22607 806 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 FSHRP23945 695 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 OR1D2P34982 312 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 UBA7P41226 1012 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
SREBF1-215ENST00000487401 SLC12A3P55017 1021 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 RAB33AQ14088 237 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 UPP1Q16831 310 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 XKR4Q5GH76 650 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 ALKAL1Q6UXT8 129 aa13.63□□□□□ -0.23
SREBF1-215ENST00000487401 GET4Q7L5D6 327 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-215ENST00000487401 CEP120Q8N960 986 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms