RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 ACAP3Q96P50 834 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 PYM1Q9BRP8 204 aaKnown RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 STRA6Q9BX79 667 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 LRRC27Q9C0I9 530 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 KLK14Q9P0G3 267 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 FNIP2Q9P278 1114 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 TBX20Q9UMR3 447 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 TDRD15B5MCY1 1934 aaKnown RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 A0A087X0B3 334 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 PER2O15055 1255 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 CLDN3O15551 220 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 FAM189A1O60320 539 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 ADH1AP07327 375 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 ADRB2P07550 413 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 CLCN4P51793 760 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
RNF220-215ENST00000487332 ITIH3Q06033 890 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 USP41Q3LFD5 358 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
RNF220-215ENST00000487332 KIAA0319Q5VV43 1072 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 ELMSAN1Q6PJG2 1045 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 CEP120Q8N960 986 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 SLC22A17Q8WUG5 538 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
RNF220-215ENST00000487332 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 S1PR5Q9H228 398 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 KBTBD4Q9NVX7 518 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 DPP7Q9UHL4 492 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 USP20Q9Y2K6 914 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 GDAQ9Y2T3 454 aa11.23□□□□□ -0.61
RNF220-215ENST00000487332 SMIM28A0A1B0GU29 152 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 MYMKA6NI61 221 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
RNF220-215ENST00000487332 OGTO15294 1046 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 KIF4AO95239 1232 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 LIG4P49917 911 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 PKP1Q13835 747 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
RNF220-215ENST00000487332 UPP1Q16831 310 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 SYCE2Q6PIF2 218 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 CYP26C1Q6V0L0 522 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
RNF220-215ENST00000487332 EP400NLQ6ZTU2 488 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 ZNF720Q7Z2F6 126 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 IQUBQ8NA54 791 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
RNF220-215ENST00000487332 PIK3R5Q8WYR1 880 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 BICD1Q96G01 975 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 NECTIN4Q96NY8 510 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 TCHPQ9BT92 498 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 SFXN1Q9H9B4 322 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 RCOR1Q9UKL0 485 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 USP15Q9Y4E8 981 aaPredicted RBP11.22□□□□□ -0.61
RNF220-215ENST00000487332 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 STYXL1Q9Y6J8 313 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 VCANP13611 3396 aa11.22□□□□□ -0.61
RNF220-215ENST00000487332 A0A0B4J269 797 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 TTC26A0AVF1 554 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 CASTOR2A6NHX0 329 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 F8W810 466 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 TADA2AO75478 443 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 CLTAP09496 248 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 CNPP09543 421 aaKnown RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 CYP3A5P20815 502 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 PAX3P23760 479 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 AMPD3Q01432 767 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 BECN1Q14457 450 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 CBX2Q14781 532 aaPredicted RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 L1TD1Q5T7N2 865 aaKnown RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 RESP18Q5W5W9 173 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 SLFN12LQ6IEE8 588 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 DCLRE1AQ6PJP8 1040 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 C15orf39Q6ZRI6 1047 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 CD302Q8IX05 232 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 GJD3Q8N144 294 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 AUTS2Q8WXX7 1259 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 ZBTB45Q96K62 511 aaPredicted RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 NECAB3Q96P71 396 aaPredicted RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 TTPALQ9BTX7 342 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 PHF7Q9BWX1 381 aaPredicted RBP11.21□□□□□ -0.61
RNF220-215ENST00000487332 GPR62Q9BZJ7 368 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 HAPLN2Q9GZV7 340 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 ADAM7Q9H2U9 754 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 EXOC7Q9UPT5 735 aa11.21□□□□□ -0.61
RNF220-215ENST00000487332 UBE4BO95155 1302 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 LOC730098B7Z3J9 87 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 TEX28O15482 410 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 MEFVO15553 781 aaPredicted RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 XPOTO43592 962 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 POU2F2P09086 479 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms