RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 NEMFO60524 1076 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 RECQL4O94761 1208 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 THP07101 528 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 XRCC6P12956 609 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 FDPSP14324 419 aaKnown RBP21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 MLF2Q15773 248 aaPredicted RBP21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 FAM187BQ17R55 369 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 DGLUCYQ7Z3D6 616 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 ZBTB8OSQ8IWT0 167 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 DCLK2Q8N568 766 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 SLC7A14Q8TBB6 771 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 MTMR9Q96QG7 549 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 WDR87Q6ZQQ6 2873 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 MYH15Q9Y2K3 1946 aa21.5■■□□□ 1.03
SMPDL3A-202ENST00000487215 N4BP3O15049 544 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 XYLBO75191 536 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 PRKCQQ04759 706 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 ELAVL2Q12926 359 aaKnown RBP21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 PDXDC1Q6P996 788 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 SUMF1Q8NBK3 374 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 MCPH1Q8NEM0 835 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 MTF2Q9Y483 593 aaPredicted RBP21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 FANCMQ8IYD8 2048 aa21.49■■□□□ 1.03
SMPDL3A-202ENST00000487215 POU2F2P09086 479 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 SPATA31C1P0DKV0 1188 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 PRPF4BQ13523 1007 aaKnown RBP21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 RAB33AQ14088 237 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 SLC44A4Q53GD3 710 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 AXDND1Q5T1B0 1012 aaPredicted RBP21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 NOSTRINQ8IVI9 506 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 NPAS3Q8IXF0 933 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 BSNDQ8WZ55 320 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 KXD1Q9BQD3 176 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 BCO2Q9BYV7 579 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 SPATA6Q9NWH7 488 aaPredicted RBP21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 HCFC1R1Q9NWW0 138 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 USP20Q9Y2K6 914 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 DOCK6Q96HP0 2047 aa21.48■■□□□ 1.03
SMPDL3A-202ENST00000487215 DNAH14Q0VDD8 3507 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 BTBD18B2RXH4 712 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 KINO60870 393 aaKnown RBP21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 ATP2B1P20020 1258 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 OR1D2P34982 312 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 PUM1Q14671 1186 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 UBXN2BQ14CS0 331 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 TMEM132AQ24JP5 1023 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 ZNF528Q3MIS6 628 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 C2orf40Q9H1Z8 148 aa21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 DNMT3BQ9UBC3 853 aaKnown RBP21.47■■□□□ 1.03
SMPDL3A-202ENST00000487215 LAMTOR5O43504 91 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 MED24O75448 989 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 EDN1P05305 212 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 PRKCBP05771 671 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 FGFR3P22607 806 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 IGFBP6P24592 240 aaPredicted RBP21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 PFKPQ01813 784 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 MAPK6Q16659 721 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 UVSSAQ2YD98 709 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 PABPC1LQ4VXU2 614 aaKnown RBP21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 EEF1DP3Q658K8 133 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 CATSPER3Q86XQ3 398 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 DIS3L2Q8IYB7 885 aaKnown RBP21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 NECAB1Q8N987 351 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 ADPGKQ9BRR6 497 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 OSBPL6Q9BZF3 934 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 CCDC113Q9H0I3 377 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 TMEM60Q9H2L4 133 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 TUFT1Q9NNX1 390 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 LTB4R2Q9NPC1 389 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 DLL3Q9NYJ7 618 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 MTRRQ9UBK8 725 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 FBXO4Q9UKT5 387 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 KCNH3Q9ULD8 1083 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 OTOGLQ3ZCN5 2332 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 FRYLO94915 3013 aa21.46■■□□□ 1.03
SMPDL3A-202ENST00000487215 VWA8A3KMH1 1905 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 MIA3Q5JRA6 1907 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 FAM170BA6NMN3 283 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 TMEM189-UBE2V1I3L0A0 370 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 ACKR2O00590 384 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 LIG1P18858 919 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 CD72P21854 359 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 RSPO2Q6UXX9 243 aaPredicted RBP21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 ING5Q8WYH8 240 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 GDAQ9Y2T3 454 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 CDY1Q9Y6F8 540 aa21.45■■□□□ 1.02
SMPDL3A-202ENST00000487215 PATJQ8NI35 1801 aa21.44■■□□□ 1.02
SMPDL3A-202ENST00000487215 FOSBP53539 338 aa21.44■■□□□ 1.02
SMPDL3A-202ENST00000487215 GLRA4Q5JXX5 417 aa21.44■■□□□ 1.02
SMPDL3A-202ENST00000487215 NACC1Q96RE7 527 aa21.44■■□□□ 1.02
SMPDL3A-202ENST00000487215 CACNA1IQ9P0X4 2223 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 SPTLC1O15269 473 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 B3GAT3O94766 335 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 LARGE1O95461 756 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 MAGEA9P43362 315 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 NAMPTP43490 491 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 RBM25P49756 843 aaKnown RBP21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 CLCNKBP51801 687 aa21.43■■□□□ 1.02
SMPDL3A-202ENST00000487215 CSTF1Q05048 431 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms