RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 EAF2Q96CJ1 260 aaPredicted RBP4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 RAX2Q96IS3 184 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 QRSL1Q9H0R6 528 aaKnown RBP4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 TCF7L1Q9HCS4 588 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 ALG13Q9NP73 1137 aaKnown RBP4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 DNAJC28Q9NX36 388 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 DKK2Q9UBU2 259 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 IP6K2Q9UHH9 426 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 PCDHGA9Q9Y5G4 932 aaKnown RBP4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 PCDHGA8Q9Y5G5 932 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 PCDHGA7Q9Y5G6 932 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 PCDHGA6Q9Y5G7 932 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 PCDHGA3Q9Y5H0 932 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 PCDHGA2Q9Y5H1 932 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 NUMBLQ9Y6R0 609 aa4.67□□□□□ -1.66
SNRNP27-204ENST00000487029 TMEM200CA6NKL6 621 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 MAFGO15525 162 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 HOXA3O43365 443 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 PPFIA4O75335 1185 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 RFPL1O75677 317 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 RECQL4O94761 1208 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 PFKMP08237 780 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 CT47B1P0C2W7 299 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 MTHFD2P13995 350 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 GYPEP15421 78 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 ZSCAN20P17040 1043 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 AGXTP21549 392 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 USP14P54578 494 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 ACAP2Q15057 778 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 PRR16Q569H4 304 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 TOR2AQ5JU69 321 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 EFCAB2Q5VUJ9 269 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 SP5Q6BEB4 398 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 UNQ6494/PRO21346Q6UXR6 183 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 NOL8Q76FK4 1167 aaKnown RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 KCNK18Q7Z418 384 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 CMTR2Q8IYT2 770 aaKnown RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 CPA6Q8N4T0 437 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 SUPT20HQ8NEM7 779 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 RSAD2Q8WXG1 361 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 JPH3Q8WXH2 748 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 RHOBTB2Q9BYZ6 727 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 HAPLN2Q9GZV7 340 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 ENKD1Q9H0I2 346 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 KCTD10Q9H3F6 313 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 MTG2Q9H4K7 406 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 ZNF277Q9NRM2 450 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 POLR3BQ9NW08 1133 aaPredicted RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 KCMF1Q9P0J7 381 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 EIF2B4Q9UI10 523 aaKnown RBP4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 TMPRSS11EQ9UL52 423 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 EDARQ9UNE0 448 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 FRMD4BQ9Y2L6 1034 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 GPR45Q9Y5Y3 372 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 MYPNQ86TC9 1320 aa4.66□□□□□ -1.66
SNRNP27-204ENST00000487029 COL3A1P02461 1466 aaPredicted RBP4.65□□□□□ -1.66
SNRNP27-204ENST00000487029 OPHN1O60890 802 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 NCR1O76036 304 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 PCDH8O95206 1070 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 LPLP06858 475 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 APOBEC3AP31941 199 aaPredicted RBP4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 MTNR1BP49286 362 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 SLC5A3P53794 718 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 ODF1Q14990 250 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 FAM102BQ5T8I3 360 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 NXNQ6DKJ4 435 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 WDR75Q8IWA0 830 aaKnown RBP4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 SIMC1Q8NDZ2 872 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 OR52N2Q8NGI0 321 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 AUTS2Q8WXX7 1259 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 LINC00476Q8WZB0 136 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 CCDC136Q96JN2 1154 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 C8orf48Q96LL4 319 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 TEKT5Q96M29 485 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 FAM193BQ96PV7 902 aaPredicted RBP4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 CPPED1Q9BRF8 314 aaPredicted RBP4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 SLC46A2Q9BY10 475 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 TEX101Q9BY14 249 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 PITHD1Q9GZP4 211 aaPredicted RBP4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 ANKRD6Q9Y2G4 727 aa4.65□□□□□ -1.67
SNRNP27-204ENST00000487029 A0A0A6YYJ9 748 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 PF4V1P10720 104 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 OSMP13725 252 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 VCAM1P19320 739 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 GPR15P49685 360 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 SEC24CP53992 1094 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 LGALS4P56470 323 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 TRIM25Q14258 630 aaKnown RBP4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 MUM1Q2TAK8 710 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 LYSMD2Q8IV50 215 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 SLC41A1Q8IVJ1 513 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 ARHGEF19Q8IW93 802 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 TCEAL8Q8IYN2 117 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 MYO1HQ8N1T3 1032 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 CDYL2Q8N8U2 506 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 OR14C36Q8NHC7 312 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 JADE3Q92613 823 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 HSPBAP1Q96EW2 488 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 NUP88Q99567 741 aaPredicted RBP4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 LRFN3Q9BTN0 628 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms