RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 CYP11B1P15538 503 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 MAN1A1P33908 653 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 RNF43Q68DV7 783 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 ACAD10Q6JQN1 1059 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 CGB2Q6NT52 195 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 KIRREL3Q8IZU9 778 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 CYP4X1Q8N118 509 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 PPM1KQ8N3J5 372 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 MAGEB18Q96M61 343 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 NINJ2Q9NZG7 142 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 A0A1W2PRG0 241 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 A8MUI8 341 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 G3V3G9 751 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 THAP12O43422 761 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 GH2P01242 217 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 CHRM1P11229 460 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 STX2P32856 288 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 MSH2P43246 934 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ARHGEF18Q6ZSZ5 1173 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 GRK7Q8WTQ7 553 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 MAIP1Q8WWC4 291 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ATG4AQ8WYN0 398 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 SEMA4DQ92854 862 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 RMDN2Q96LZ7 410 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 MRIQ9BWK5 157 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 DNAJC17Q9NVM6 304 aaKnown RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ANAPC5Q9UJX4 755 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 STK38LQ9Y2H1 464 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ADGRA3Q8IWK6 1321 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 IPO5O00410 1097 aaKnown RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 SORBS3O60504 671 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ECM2O94769 699 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 CCNB1P14635 433 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ATF2P15336 505 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 SKIV2L2P42285 1042 aaKnown RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 STAT2P52630 851 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 MGAT5Q09328 741 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 ACVR2BQ13705 512 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 MTFR1Q15390 333 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 TRIP13Q15645 432 aaPredicted RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
COL3A1-206ENST00000487010 GRAMD1AQ96CP6 724 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 FAXDC2Q96IV6 333 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 TRIM7Q9C029 511 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 DCLK3Q9C098 648 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 EHMT1Q9H9B1 1298 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 TRIM33Q9UPN9 1127 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 NAALADL1Q9UQQ1 740 aa13.03□□□□□ -0.32
COL3A1-206ENST00000487010 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
COL3A1-206ENST00000487010 GAS8O95995 478 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 ADRB2P07550 413 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 CETPP11597 493 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 PLS3P13797 630 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 PAX7P23759 505 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 RBM5P52756 815 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL3A1-206ENST00000487010 MCCD1P59942 119 aaPredicted RBP13.02□□□□□ -0.33
COL3A1-206ENST00000487010 CCDC15Q0P6D6 951 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 KIAA0825Q8IV33 1275 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 ZNF570Q96NI8 536 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 ACTL7BQ9Y614 415 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.33
COL3A1-206ENST00000487010 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
COL3A1-206ENST00000487010 CDH16O75309 829 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 TAC1P20366 129 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 MAPK4P31152 587 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ADCY8P40145 1251 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
COL3A1-206ENST00000487010 LACTBP83111 547 aaPredicted RBP13.01□□□□□ -0.33
COL3A1-206ENST00000487010 GTF2BQ00403 316 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 STRN3Q13033 797 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 PPP1R21Q6ZMI0 780 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 SRRM1Q8IYB3 904 aaKnown RBP13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ATL2Q8NHH9 583 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 PWWP2AQ96N64 755 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 RIT2Q99578 217 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 HERPUD2Q9BSE4 406 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 MOV10L1Q9BXT6 1211 aaKnown RBP13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ADAM22Q9P0K1 906 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 TBK1Q9UHD2 729 aa13.01□□□□□ -0.33
COL3A1-206ENST00000487010 ANAPC7Q9UJX3 599 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms