RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 COL4A3BPQ9Y5P4 624 aa12.98□□□□□ -0.33
AGAP3-220ENST00000486946 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
AGAP3-220ENST00000486946 AXIN1O15169 862 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 HOXA11P31270 313 aaPredicted RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 SATB1Q01826 763 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 INF2Q27J81 1249 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 SOWAHCQ53LP3 525 aaPredicted RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 LONP2Q86WA8 852 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 GLYCTKQ8IVS8 523 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 RNF168Q8IYW5 571 aaPredicted RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 ARRDC1-AS1Q9H2J1 176 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 DHX33Q9H6R0 707 aaKnown RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 MARCH5Q9NX47 278 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 WRAP73Q9P2S5 460 aaPredicted RBP12.97□□□□□ -0.33
AGAP3-220ENST00000486946 VAV3Q9UKW4 847 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
AGAP3-220ENST00000486946 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 DEXIO95424 95 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 POMCP01189 267 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 ANP32AP39687 249 aaKnown RBP12.96□□□□□ -0.33
AGAP3-220ENST00000486946 QARSP47897 775 aaKnown RBP12.96□□□□□ -0.33
AGAP3-220ENST00000486946 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 PPP2R5CQ13362 524 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 BECN1Q14457 450 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 CCDC6Q16204 474 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 SRGAP1Q7Z6B7 1085 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
AGAP3-220ENST00000486946 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 DNASE1L2Q92874 299 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 SNX21Q969T3 373 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 TMEM143Q96AN5 459 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 ZNF274Q96GC6 653 aaPredicted RBP12.96□□□□□ -0.33
AGAP3-220ENST00000486946 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
AGAP3-220ENST00000486946 FNIP2Q9P278 1114 aa12.96□□□□□ -0.33
AGAP3-220ENST00000486946 GIPC1O14908 333 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 ECI2O75521 394 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 EFEMP2O95967 443 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
AGAP3-220ENST00000486946 OR1G1P47890 313 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 RNF43Q68DV7 783 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
AGAP3-220ENST00000486946 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 HSCBQ8IWL3 235 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 SMG8Q8ND04 991 aaKnown RBP12.95□□□□□ -0.34
AGAP3-220ENST00000486946 PSPC1Q8WXF1 523 aaKnown RBP12.95□□□□□ -0.34
AGAP3-220ENST00000486946 LOXL4Q96JB6 756 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 CEP170P1Q96L14 293 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 LARP6Q9BRS8 491 aaKnown RBP12.95□□□□□ -0.34
AGAP3-220ENST00000486946 SCNM1Q9BWG6 230 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 CHST7Q9NS84 486 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 KCNJ14Q9UNX9 436 aa12.95□□□□□ -0.34
AGAP3-220ENST00000486946 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
AGAP3-220ENST00000486946 CPLX1O14810 134 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 DKC1O60832 514 aaKnown RBP eCLIP12.94□□□□□ -0.34
AGAP3-220ENST00000486946 XYLBO75191 536 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 TOP3BO95985 862 aaKnown RBP12.94□□□□□ -0.34
AGAP3-220ENST00000486946 RFC5P40937 340 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 CREMQ03060 361 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 EMC2Q15006 297 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 PPM1LQ5SGD2 360 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
AGAP3-220ENST00000486946 SPEM1Q8N4L4 309 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 RNF149Q8NC42 400 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 FAM3CQ92520 227 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 HAS1Q92839 578 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 LXNQ9BS40 222 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 EIF2AQ9BY44 585 aaKnown RBP12.94□□□□□ -0.34
AGAP3-220ENST00000486946 PLA2G2FQ9BZM2 168 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
AGAP3-220ENST00000486946 POLIQ9UNA4 740 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 IPPQ9Y573 584 aa12.94□□□□□ -0.34
AGAP3-220ENST00000486946 F8W810 466 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 CCL16O15467 120 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 EPN2O95208 641 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
AGAP3-220ENST00000486946 ITGA4P13612 1032 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 RPL17P18621 184 aaKnown RBP12.93□□□□□ -0.34
AGAP3-220ENST00000486946 YWHABP31946 246 aaKnown RBP12.93□□□□□ -0.34
AGAP3-220ENST00000486946 MLH1P40692 756 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 DSC1Q08554 894 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 STK3Q13188 491 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 USP41Q3LFD5 358 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 LIN9Q5TKA1 542 aa12.93□□□□□ -0.34
AGAP3-220ENST00000486946 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms