RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 TMEM161AQ9NX61 479 aa10.4□□□□□ -0.74
MCF2L-227ENST00000486806 MAGEC2Q9UBF1 373 aaPredicted RBP10.4□□□□□ -0.74
MCF2L-227ENST00000486806 GIT1Q9Y2X7 761 aa10.4□□□□□ -0.74
MCF2L-227ENST00000486806 COL4A6Q14031 1691 aa10.4□□□□□ -0.74
MCF2L-227ENST00000486806 PTGESO14684 152 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 IL18RAPO95256 599 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 EOMESO95936 686 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 TRIM49P0CI25 452 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 TRIM49CP0CI26 452 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 ITGA4P13612 1032 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 KRT13P13646 458 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 MLH1P40692 756 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 RGS19P49795 217 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 VAMP7P51809 220 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 YARSP54577 528 aaKnown RBP10.39□□□□□ -0.75
MCF2L-227ENST00000486806 WDR5P61964 334 aaKnown RBP10.39□□□□□ -0.75
MCF2L-227ENST00000486806 DLG4P78352 724 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 PPP2R3AQ06190 1150 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 MAN2A1Q16706 1144 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 TMEM240Q5SV17 173 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 SARM1Q6SZW1 724 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.39□□□□□ -0.75
MCF2L-227ENST00000486806 NPAS4Q8IUM7 802 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 WDR49Q8IV35 697 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 CD302Q8IX05 232 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 GSTCDQ8NEC7 633 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 LPPQ93052 612 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 PGBD4Q96DM1 585 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 ZMAT2Q96NC0 199 aaKnown RBP10.39□□□□□ -0.75
MCF2L-227ENST00000486806 TUBGCP2Q9BSJ2 902 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 APOL6Q9BWW8 343 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 CXCL16Q9H2A7 254 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 ASB7Q9H672 318 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 RSAD1Q9HA92 442 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 PDE11AQ9HCR9 933 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 UBN1Q9NPG3 1134 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 NR2E3Q9Y5X4 410 aa10.39□□□□□ -0.75
MCF2L-227ENST00000486806 RALGAPA2Q2PPJ7 1873 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 A0A1B0GTH6 734 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 ARL5CA6NH57 179 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 LGALS16A8MUM7 142 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 LACTBL1A8MY62 500 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 PMM2O15305 246 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 AP5Z1O43299 807 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 NFICP08651 508 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 ACTN1P12814 892 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 KCNE1P15382 129 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 MTIF2P46199 727 aaKnown RBP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 AFF1P51825 1210 aaKnown RBP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 COPB1P53618 953 aaKnown RBP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 DEFB103AP81534 67 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 FANCCQ00597 558 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 PPP3CAQ08209 521 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 SURF1Q15526 300 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 UVSSAQ2YD98 709 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 DCAF17Q5H9S7 520 aaPredicted RBP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 CLLU1OSQ5K130 101 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 JADE1Q6IE81 842 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 ZNF365Q70YC5 407 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 USP37Q86T82 979 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 NT5DC4Q86YG4 428 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 TET1Q8NFU7 2136 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 HERVK_113Q902F9 699 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 CCDC127Q96BQ5 260 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 FNBP1Q96RU3 617 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 TSPAN18Q96SJ8 248 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 RC3H2Q9HBD1 1191 aaKnown RBP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 INTS13Q9NVM9 706 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 TAB2Q9NYJ8 693 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 PARP2Q9UGN5 583 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 PLAGL2Q9UPG8 496 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 DERAQ9Y315 318 aa10.38□□□□□ -0.75
MCF2L-227ENST00000486806 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.38□□□□□ -0.75
MCF2L-227ENST00000486806 SMIM28A0A1B0GU29 152 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 OFD1O75665 1012 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 AFPP02771 609 aaKnown RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 FGFR1P11362 822 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 CDK11BP21127 795 aaKnown RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 GTF2H1P32780 548 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 MAGEA10P43363 369 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 GSE1Q14687 1217 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 NAB2Q15742 525 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 ZBTB6Q15916 424 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 ZACNQ401N2 412 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 CBWD6Q4V339 395 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 VWA3BQ502W6 1294 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 CBWD3Q5JTY5 395 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 GLRA4Q5JXX5 417 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 CBWD5Q5RIA9 395 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 RASIP1Q5U651 963 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 TCERG1LQ5VWI1 586 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 LMBRD2Q68DH5 695 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms