RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 EXTL3O43909 919 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 ZC3H11AO75152 810 aaKnown RBP eCLIP13.49□□□□□ -0.25
C9orf16-202ENST00000486420 ADRB2P07550 413 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 MYBP10242 640 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 MYOGP15173 224 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 AKAP5P24588 427 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 ENPEPQ07075 957 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 ELMSAN1Q6PJG2 1045 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 FOXR2Q6PJQ5 311 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 ZBTB33Q86T24 672 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 SLC9A9Q8IVB4 645 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 GPD1LQ8N335 351 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 LPPQ93052 612 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
C9orf16-202ENST00000486420 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 SNX27Q96L92 541 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 TSG101Q99816 390 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 CWH43Q9H720 699 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
C9orf16-202ENST00000486420 GDAQ9Y2T3 454 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 R3HCC1Q9Y3T6 440 aaKnown RBP13.49□□□□□ -0.25
C9orf16-202ENST00000486420 C2CD2Q9Y426 696 aa13.49□□□□□ -0.25
C9orf16-202ENST00000486420 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 PSMA7O14818 248 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 FGF18O76093 207 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 PRPF6O94906 941 aaKnown RBP13.48□□□□□ -0.25
C9orf16-202ENST00000486420 C1RP00736 705 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 SRGAP2BP0DMP2 458 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 HARSP12081 509 aaKnown RBP13.48□□□□□ -0.25
C9orf16-202ENST00000486420 SCNN1GP51170 649 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 AP3M2P53677 418 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 BCAR1P56945 870 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 DSC1Q08554 894 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 NFIL3Q16649 462 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 ALKAL1Q6UXT8 129 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 CDR2LQ86X02 465 aaPredicted RBP13.48□□□□□ -0.25
C9orf16-202ENST00000486420 XXYLT1Q8NBI6 393 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 SCFD1Q8WVM8 642 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
C9orf16-202ENST00000486420 C17orf80Q9BSJ5 609 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 DACH1Q9UI36 760 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
C9orf16-202ENST00000486420 HES2Q9Y543 173 aa13.48□□□□□ -0.25
C9orf16-202ENST00000486420 SF3B1O75533 1304 aaKnown RBP eCLIP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 SMIM28A0A1B0GU29 152 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 BICDL2A1A5D9 508 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 MAPK13O15264 365 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 POMCP01189 267 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 GALTP07902 379 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 LRRC63Q05C16 580 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 STK4Q13043 487 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 EDRF1Q3B7T1 1238 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 COLGALT2Q8IYK4 626 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 GRAMD1CQ8IYS0 662 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 OXCT2Q9BYC2 517 aaPredicted RBP13.47□□□□□ -0.25
C9orf16-202ENST00000486420 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 TLR9Q9NR96 1032 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 AGPAT3Q9NRZ7 376 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 DPP7Q9UHL4 492 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 PLAGL2Q9UPG8 496 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 TRAF3IP3Q9Y228 551 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 FRMD4BQ9Y2L6 1034 aa13.47□□□□□ -0.25
C9orf16-202ENST00000486420 FNDC1Q4ZHG4 1894 aaPredicted RBP13.46□□□□□ -0.25
C9orf16-202ENST00000486420 DLL1O00548 723 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 GADD45BO75293 160 aaPredicted RBP13.46□□□□□ -0.25
C9orf16-202ENST00000486420 FGFR1OPO95684 399 aaKnown RBP13.46□□□□□ -0.25
C9orf16-202ENST00000486420 EDN1P05305 212 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 IGFBP4P22692 258 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 PNPLA4P41247 253 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 OR1G1P47890 313 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 CASP5P51878 434 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 PNOCQ13519 176 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 LRRC55Q6ZSA7 311 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 BRSK2Q8IWQ3 736 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 DHTKD1Q96HY7 919 aaPredicted RBP13.46□□□□□ -0.25
C9orf16-202ENST00000486420 IGSF21Q96ID5 467 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.25
C9orf16-202ENST00000486420 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.46□□□□□ -0.252e-13■□□□□ 10.3
C9orf16-202ENST00000486420 RBAKQ9NYW8 714 aaPredicted RBP13.46□□□□□ -0.25
C9orf16-202ENST00000486420 HSPBP1Q9NZL4 362 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 KIAA1468Q9P260 1216 aa13.46□□□□□ -0.25
C9orf16-202ENST00000486420 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms