RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 CDH24Q86UP0 819 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 TBCKQ8TEA7 893 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 RPF1Q9H9Y2 349 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 ARHGEF3Q9NR81 526 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 RCOR1Q9UKL0 485 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 CDYLQ9Y232 598 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 C5orf58C9J3I9 102 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 RESTQ13127 1097 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 KPNB1Q14974 876 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 ASPRV1Q53RT3 343 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 ARMCX4Q5H9R4 360 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 CCDC60Q8IWA6 550 aaPredicted RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 TRIM63Q969Q1 353 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 CLMNQ96JQ2 1002 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 AFF4Q9UHB7 1163 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 IP6K2Q9UHH9 426 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 HERC5Q9UII4 1024 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 PCDHGB4Q9UN71 923 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 SPDYE5A6NIY4 337 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
GABRE-209ENST00000486255 DNALI1O14645 258 aaPredicted RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 CTSWP56202 376 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 TFDP2Q14188 446 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 SPDYE7PQ495Y7 208 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 GADL1Q6ZQY3 521 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 TNIP2Q8NFZ5 429 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 FAM32AQ9Y421 112 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 MAP2P11137 1827 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 KLHL2O95198 593 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 EIF2B2P49770 351 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 PDAP1Q13442 181 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 NAALADL2Q58DX5 795 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 SLFN13Q68D06 897 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 GLMNQ92990 594 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 OPTNQ96CV9 577 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 LRRC39Q96DD0 335 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 OSBPL3Q9H4L5 887 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 SMG5Q9UPR3 1016 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 AP4S1Q9Y587 144 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 CPDO75976 1380 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 PHF20L1A8MW92 1017 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 ATP1A1P05023 1023 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 ATP6V1B1P15313 513 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 TYK2P29597 1187 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 SNAP25P60880 206 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 DALRD3Q5D0E6 543 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 AGBL2Q5U5Z8 902 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 PASD1Q8IV76 773 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 CDKL3Q8IVW4 592 aaPredicted RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 WDR11Q9BZH6 1224 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 CAAP1Q9H8G2 361 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 NOD2Q9HC29 1040 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
GABRE-209ENST00000486255 MTO1Q9Y2Z2 717 aaKnown RBP9.24□□□□□ -0.93
GABRE-209ENST00000486255 INO80B-WBP1J3KQ70 363 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 BNIP3LO60238 219 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 CALB1P05937 261 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 ADRM1Q16186 407 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 ARMCX6Q7L4S7 300 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 KIF2BQ8N4N8 673 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 INO80BQ9C086 356 aaPredicted RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 FANCEQ9HB96 536 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 DCDC2Q9UHG0 476 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 PCDHA1Q9Y5I3 950 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 LGALS16A8MUM7 142 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 MYBL1P10243 752 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 OSTNP61366 133 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 HIC2Q96JB3 615 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 CEP170P1Q96L14 293 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 ZFP42Q96MM3 310 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 AKAP12Q02952 1782 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 EIF2S1P05198 315 aaKnown RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 GYS1P13807 737 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 DLGAP5Q15398 846 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 ZCWPW2Q504Y3 356 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 PKN3Q6P5Z2 889 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 PRPF39Q86UA1 669 aaKnown RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 BBS7Q8IWZ6 715 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 VIPAS39Q9H9C1 493 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 SENP1Q9P0U3 644 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 TMA7Q9Y2S6 64 aaKnown RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 TRIM24O15164 1050 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 ICA1Q05084 483 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 MICU2Q8IYU8 434 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 ABI1Q8IZP0 508 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 STAG2Q8N3U4 1231 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 SLC7A3Q8WY07 619 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 RNF25Q96BH1 459 aaPredicted RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 PLEKHA8Q96JA3 519 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 NLRP4Q96MN2 994 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 MSTO1Q9BUK6 570 aa9.23□□□□□ -0.93
GABRE-209ENST00000486255 NGRNQ9NPE2 291 aaKnown RBP9.23□□□□□ -0.93
GABRE-209ENST00000486255 NDFIP2Q9NV92 336 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms