RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 NACC1Q96RE7 527 aa19.41■□□□□ 0.7
MCF2L-226ENST00000486210 GOLPH3LQ9H4A5 285 aa19.41■□□□□ 0.7
MCF2L-226ENST00000486210 DOCK6Q96HP0 2047 aa19.41■□□□□ 0.7
MCF2L-226ENST00000486210 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 F8W810 466 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 SLC26A4O43511 780 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 URODP06132 367 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 DCNP07585 359 aaKnown RBP19.4■□□□□ 0.7
MCF2L-226ENST00000486210 SRFP11831 508 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 XKR9Q5GH70 373 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 KIAA0319Q5VV43 1072 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 COLGALT2Q8IYK4 626 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 KIAA2013Q8IYS2 634 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 PDILTQ8N807 584 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 SMG8Q8ND04 991 aaKnown RBP19.4■□□□□ 0.7
MCF2L-226ENST00000486210 CDK5RAP3Q96JB5 506 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 FAM193BQ96PV7 902 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-226ENST00000486210 DHX33Q9H6R0 707 aaKnown RBP19.4■□□□□ 0.7
MCF2L-226ENST00000486210 RXFP1Q9HBX9 757 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 BLOC1S4Q9NUP1 217 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 KANSL3Q9P2N6 904 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 PRG3Q9Y2Y8 225 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-226ENST00000486210 CNTNAP2Q9UHC6 1331 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 COL4A3Q01955 1670 aa19.4■□□□□ 0.7
MCF2L-226ENST00000486210 ARID2Q68CP9 1835 aa19.39■□□□□ 0.7
MCF2L-226ENST00000486210 ASAP2O43150 1006 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 PRPF40AO75400 957 aaKnown RBP19.39■□□□□ 0.69
MCF2L-226ENST00000486210 GLUD1P00367 558 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 ADH1AP07327 375 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 SPATA31D3P0C874 917 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 SRGAP2CP0DJJ0 459 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 PFKFB1P16118 471 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 TXLNAP40222 546 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 RARRES1P49788 294 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 NCBP1Q09161 790 aaKnown RBP19.39■□□□□ 0.69
MCF2L-226ENST00000486210 EMC2Q15006 297 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 CYP26C1Q6V0L0 522 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 SPATA31D4Q6ZUB0 917 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 FSIP1Q8NA03 581 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 RASSF8Q8NHQ8 419 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 PRPF31Q8WWY3 499 aaKnown RBP19.39■□□□□ 0.69
MCF2L-226ENST00000486210 SMG7Q92540 1137 aaKnown RBP19.39■□□□□ 0.69
MCF2L-226ENST00000486210 STAMQ92783 540 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 TMEM143Q96AN5 459 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 NT5C3AQ9H0P0 336 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 ANKEF1Q9NU02 776 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 MIOSQ9NXC5 875 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 FAM13BQ9NYF5 915 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 DNM3Q9UQ16 869 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 HPSEQ9Y251 543 aa19.39■□□□□ 0.69
MCF2L-226ENST00000486210 FAM237AA0A1B0GTK4 181 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 ERLIN2O94905 339 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 SP9P0CG40 484 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 XRCC6P12956 609 aaKnown RBP eCLIP19.38■□□□□ 0.69
MCF2L-226ENST00000486210 OR1G1P47890 313 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 GLUD2P49448 558 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 NDUFA8P51970 172 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 DSC1Q08554 894 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 LAMTOR4Q0VGL1 99 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 MIA3Q5JRA6 1907 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 RRAGBQ5VZM2 374 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 PHLDB3Q6NSJ2 640 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 ST13P5Q8NFI4 369 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-226ENST00000486210 NXPE3Q969Y0 559 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 MTRQ99707 1265 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 BMP2KQ9NSY1 1161 aaPredicted RBP19.38■□□□□ 0.69
MCF2L-226ENST00000486210 CACNA1IQ9P0X4 2223 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 SSX2IPQ9Y2D8 614 aa19.38■□□□□ 0.69
MCF2L-226ENST00000486210 OTOGLQ3ZCN5 2332 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 GLULP15104 373 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 RFX1P22670 979 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 DSG1Q02413 1049 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 TFDP1Q14186 410 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 MCM6Q14566 821 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 E2F4Q16254 413 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 DGLUCYQ7Z3D6 616 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 RNF149Q8NC42 400 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 CNNM3Q8NE01 707 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 RAD54LQ92698 747 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 DHX58Q96C10 678 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
MCF2L-226ENST00000486210 BHMT2Q9H2M3 363 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 ARHGEF3Q9NR81 526 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 CHST7Q9NS84 486 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 KCNH3Q9ULD8 1083 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 IPPQ9Y573 584 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 PATJQ8NI35 1801 aa19.37■□□□□ 0.69
MCF2L-226ENST00000486210 GOLGA6L4A6NEF3 574 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 ANHXE9PGG2 379 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 POLR2DO15514 142 aaKnown RBP19.36■□□□□ 0.69
MCF2L-226ENST00000486210 TGM5O43548 720 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 PLA2G4BP0C869 781 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 LAMP2P13473 410 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 MLH1P40692 756 aa19.36■□□□□ 0.69
MCF2L-226ENST00000486210 SLC12A3P55017 1021 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms