RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 APOL5Q9BWW9 433 aa18.24■□□□□ 0.51
CCHCR1-214ENST00000486060 PARVGQ9HBI0 331 aa18.24■□□□□ 0.51
CCHCR1-214ENST00000486060 CHST7Q9NS84 486 aa18.24■□□□□ 0.51
CCHCR1-214ENST00000486060 CCDC39Q9UFE4 941 aa18.24■□□□□ 0.51
CCHCR1-214ENST00000486060 SMIM28A0A1B0GU29 152 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 C2CD2LO14523 706 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 TRAK2O60296 914 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 TOM1L1O75674 476 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 KIF4AO95239 1232 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 HARSP12081 509 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 STRN3Q13033 797 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 AXDND1Q5T1B0 1012 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 SLC39A4Q6P5W5 647 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 SHC4Q6S5L8 630 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 ZPBP2Q6X784 338 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 TMEM130Q8N3G9 435 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 DDX12PQ92771 950 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 SNX27Q96L92 541 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 IKZF4Q9H2S9 585 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 GOLGA2P5Q9HBQ8 144 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 ANKFY1Q9P2R3 1169 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 ADAM28Q9UKQ2 775 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 TBX20Q9UMR3 447 aa18.23■□□□□ 0.51
CCHCR1-214ENST00000486060 DOCK8Q8NF50 2099 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 SCN1AP35498 2009 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 FSD2A1L4K1 749 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 K7ENM7 598 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 FAM189A1O60320 539 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 PIGRP01833 764 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 KRT18P05783 430 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 GTF2BQ00403 316 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 DSG1Q02413 1049 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 MCL1Q07820 350 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 NOLC1Q14978 699 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 E2F4Q16254 413 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 ZC2HC1CQ53FD0 456 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 SFR1Q86XK3 245 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 ADHFE1Q8IWW8 467 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 GJD3Q8N144 294 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 PDILTQ8N807 584 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 C12orf76Q8N812 135 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 C3orf58Q8NDZ4 430 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 CASP10Q92851 521 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 TCHPQ9BT92 498 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 CCDC94Q9BW85 323 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 ZHX3Q9H4I2 956 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 KCNG1Q9UIX4 513 aa18.22■□□□□ 0.51
CCHCR1-214ENST00000486060 TISP43B9A030 160 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 TXLNAP40222 546 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 GLUD2P49448 558 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 CLCN4P51793 760 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 SLC10A6Q3KNW5 377 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 RTP2Q5QGT7 225 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 ZBTB41Q5SVQ8 909 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 STAMQ92783 540 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 ACAP3Q96P50 834 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 STRA6Q9BX79 667 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 FGFBP2Q9BYJ0 223 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 RXFP1Q9HBX9 757 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 PRKAG3Q9UGI9 489 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 FAM50BQ9Y247 325 aa18.21■□□□□ 0.51
CCHCR1-214ENST00000486060 ANKRD63C9JTQ0 380 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 TEX28O15482 410 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 TBCAO75347 108 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 NR1I2O75469 434 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 PPP1R37O75864 691 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 URODP06132 367 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 TNFSF9P41273 254 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 STAT6P42226 847 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 CLCNKBP51801 687 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 CCDC73Q6ZRK6 1079 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 SV2BQ7L1I2 683 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 APBB1IPQ7Z5R6 666 aaPredicted RBP18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 ST6GALNAC4Q9H4F1 302 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 CNTN3Q9P232 1028 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 STK39Q9UEW8 545 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 NOTCH4Q99466 2003 aa18.2■□□□□ 0.5
CCHCR1-214ENST00000486060 H0YCG3 227 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 CLDN3O15551 220 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 CUTAO60888 179 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 TADA2AO75478 443 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 CXCL8P10145 99 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 PDIA4P13667 645 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 KCNE1P15382 129 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 CASP5P51878 434 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 UPP1Q16831 310 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 PRSS55Q6UWB4 352 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 ZNF720Q7Z2F6 126 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 MAP4K3Q8IVH8 894 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 C18orf25Q96B23 403 aaPredicted RBP18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 PCDHA7Q9UN72 937 aa18.19■□□□□ 0.5
CCHCR1-214ENST00000486060 TSC2P49815 1807 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms