RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ACAP3Q96P50 834 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 NTPCRQ9BSD7 190 aaKnown RBP19.35■□□□□ 0.69
COL6A1-204ENST00000486023 PHF7Q9BWX1 381 aaPredicted RBP19.35■□□□□ 0.69
COL6A1-204ENST00000486023 CCSER1Q9C0I3 900 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 MUTYHQ9UIF7 546 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 SSX2IPQ9Y2D8 614 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 K7ENM7 598 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 TULP1O00294 542 aaPredicted RBP19.34■□□□□ 0.69
COL6A1-204ENST00000486023 TEX28O15482 410 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 LILRB3O75022 631 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 KIF4AO95239 1232 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 MCF2P10911 925 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 ALADP13716 330 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 RPL17P18621 184 aaKnown RBP19.34■□□□□ 0.69
COL6A1-204ENST00000486023 GRM5P41594 1212 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 FAM171A1Q5VUB5 890 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 DYMQ7RTS9 669 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 HAUS6Q7Z4H7 955 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 ADAM7Q9H2U9 754 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 GOLGA2P5Q9HBQ8 144 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 PTPRHQ9HD43 1115 aa19.34■□□□□ 0.69
COL6A1-204ENST00000486023 TOPORSQ9NS56 1045 aaPredicted RBP19.34■□□□□ 0.69
COL6A1-204ENST00000486023 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
COL6A1-204ENST00000486023 DCXO43602 365 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 ADH1AP07327 375 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 CLCN4P51793 760 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 CLCNKBP51801 687 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 SLC39A14Q15043 492 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 PRSS55Q6UWB4 352 aaPredicted RBP19.33■□□□□ 0.68
COL6A1-204ENST00000486023 KRI1Q8N9T8 703 aaKnown RBP19.33■□□□□ 0.68
COL6A1-204ENST00000486023 SUSD6Q92537 303 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 PARVGQ9HBI0 331 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 DZANK1Q9NVP4 752 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 RAPGEFL1Q9UHV5 662 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 ODF2LQ9ULJ1 636 aa19.33■□□□□ 0.68
COL6A1-204ENST00000486023 SF3B1O75533 1304 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL6A1-204ENST00000486023 SMIM28A0A1B0GU29 152 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 H0YCG3 227 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 CLDN3O15551 220 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 TRAK2O60296 914 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 TOM1L1O75674 476 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 B3GAT3O94766 335 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 IGFBP6P24592 240 aaPredicted RBP19.32■□□□□ 0.68
COL6A1-204ENST00000486023 NMT1P30419 496 aaKnown RBP19.32■□□□□ 0.68
COL6A1-204ENST00000486023 DSG1Q02413 1049 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 ITIH3Q06033 890 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 TMEM31Q5JXX7 168 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 ATAT1Q5SQI0 421 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 ZNF396Q96N95 335 aaPredicted RBP19.32■□□□□ 0.68
COL6A1-204ENST00000486023 CHST7Q9NS84 486 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 ZMYM2Q9UBW7 1377 aa19.32■□□□□ 0.68
COL6A1-204ENST00000486023 GLUD1P00367 558 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 COL9A1P20849 921 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 PROZP22891 400 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 LIG4P49917 911 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 NCKAP1LP55160 1127 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 SPAG1Q07617 926 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 NOLC1Q14978 699 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL6A1-204ENST00000486023 NAB2Q15742 525 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 RTP2Q5QGT7 225 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 RNF168Q8IYW5 571 aaPredicted RBP19.31■□□□□ 0.68
COL6A1-204ENST00000486023 PDILTQ8N807 584 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 RIPOR3Q96MK2 946 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 PPP1R10Q96QC0 940 aaKnown RBP19.31■□□□□ 0.68
COL6A1-204ENST00000486023 LRFN3Q9BTN0 628 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 POMKQ9H5K3 350 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 MAN1C1Q9NR34 630 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 TBX20Q9UMR3 447 aa19.31■□□□□ 0.68
COL6A1-204ENST00000486023 LOC730098B7Z3J9 87 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 I3L4J1 428 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 HNRNPDLO14979 420 aaKnown RBP19.3■□□□□ 0.68
COL6A1-204ENST00000486023 EFEMP2O95967 443 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 STAT6P42226 847 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 MTHFRP42898 656 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 DCLRE1AQ6PJP8 1040 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 ZPBP2Q6X784 338 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 C18orf25Q96B23 403 aaPredicted RBP19.3■□□□□ 0.68
COL6A1-204ENST00000486023 FAM212AQ96EL1 285 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 ZMAT2Q96NC0 199 aaKnown RBP19.3■□□□□ 0.68
COL6A1-204ENST00000486023 TTPALQ9BTX7 342 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 SFXN1Q9H9B4 322 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 RXFP1Q9HBX9 757 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 TBC1D7Q9P0N9 293 aa19.3■□□□□ 0.68
COL6A1-204ENST00000486023 ABLIM1O14639 778 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 SPTLC2O15270 562 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 SOX4Q06945 474 aaPredicted RBP19.29■□□□□ 0.68
COL6A1-204ENST00000486023 ZC2HC1CQ53FD0 456 aaPredicted RBP19.29■□□□□ 0.68
COL6A1-204ENST00000486023 CCDC73Q6ZRK6 1079 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 SNX27Q96L92 541 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 NECTIN4Q96NY8 510 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 HAPLN2Q9GZV7 340 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.29■□□□□ 0.68
COL6A1-204ENST00000486023 SLC38A7Q9NVC3 462 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 STK17AQ9UEE5 414 aa19.29■□□□□ 0.68
COL6A1-204ENST00000486023 CCDC195A0A1B0GUA6 201 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 MYMKA6NI61 221 aa19.28■□□□□ 0.68
COL6A1-204ENST00000486023 TGM5O43548 720 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms