RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 Q6ZVL8 140 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 NECAB2Q7Z6G3 386 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 TRMT2AQ8IZ69 625 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 FAM193BQ96PV7 902 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 KCNH6Q9H252 994 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 DMRT3Q9NQL9 472 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 TBKBP1A7MCY6 615 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 NR4A1P22736 598 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 PTPN7P35236 360 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 PPP3CAQ08209 521 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 CSRP2Q16527 193 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 BMT2Q1RMZ1 405 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 SYNE4Q8N205 404 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 CNTD1Q8N815 330 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 REPS2Q8NFH8 660 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 OR10H5Q8NGA6 315 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 LARP4BQ92615 738 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 HOXB13Q92826 284 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 HAS1Q92839 578 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 LENG9Q96B70 501 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 MENTQ9BUN1 341 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 ADI1Q9BV57 179 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 PUS7LQ9H0K6 701 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 SLC5A4Q9NY91 659 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 ATP8A1Q9Y2Q0 1164 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 GPR45Q9Y5Y3 372 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 ARAP3Q8WWN8 1544 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 SBNO2Q9Y2G9 1366 aa6.28□□□□□ -1.4
SMARCC1-207ENST00000485833 AHRRA9YTQ3 701 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 PJA2O43164 708 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 PPFIA4O75335 1185 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 MGAT1P26572 445 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 MCAMP43121 646 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 FAM47AQ5JRC9 791 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 EFCAB12Q6NXP0 572 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 RHOUQ7L0Q8 258 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 MRGPREQ86SM8 312 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 SYT12Q8IV01 421 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 TFAP2CQ92754 450 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 DCLRE1CQ96SD1 692 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 UHRF1Q96T88 793 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 SLC46A2Q9BY10 475 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 FZD1Q9UP38 647 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 KIAA0556O60303 1618 aa6.27□□□□□ -1.41
SMARCC1-207ENST00000485833 TRIM75PA6NK02 468 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 LEFTY2O00292 366 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 ENDOD1O94919 500 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 ITGB1P05556 798 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 SREBF1P36956 1147 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 PER3P56645 1201 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 TGFB2P61812 414 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 MGAT2Q10469 447 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 SP140Q13342 867 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 LRRC55Q6ZSA7 311 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 GDF7Q7Z4P5 450 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 RNF169Q8NCN4 708 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 ZFP28Q8NHY6 868 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 ZNF768Q9H5H4 540 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 ZNF277Q9NRM2 450 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 LANCL2Q9NS86 450 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 TRPM5Q9NZQ8 1165 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 CHST2Q9Y4C5 530 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 PCDHGA2Q9Y5H1 932 aa6.26□□□□□ -1.41
SMARCC1-207ENST00000485833 ARHGEF40Q8TER5 1519 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 CXorf49A8MYA2 514 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 DIRC3C9JPN6 131 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 SNRPA1P09661 255 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 RBP3P10745 1247 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 ALOX15P16050 662 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 AGXTP21549 392 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 CLRN1P58418 232 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 NHLH2Q02577 135 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 DPTQ07507 201 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 NOMO1Q15155 1222 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 ZNF627Q7L945 461 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 PQLC1Q8N2U9 271 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 SLC35B2Q8TB61 432 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 SSH1Q8WYL5 1049 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 POGKQ9P215 609 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 ATRNL1Q5VV63 1379 aa6.25□□□□□ -1.41
SMARCC1-207ENST00000485833 ABCA8O94911 1581 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 FAM171A2A8MVW0 826 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 IL2RBP14784 551 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 ZSCAN20P17040 1043 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 ZFP36P26651 326 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 GUCY1A2P33402 732 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 INHBCP55103 352 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 RNASE9P60153 205 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 INAVAQ3KP66 663 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 ATXN7L2Q5T6C5 722 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 LDLRAD3Q86YD5 345 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 ULK2Q8IYT8 1036 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 FBXO18Q8NFZ0 1043 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 PRRX2Q99811 253 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 SENP6Q9GZR1 1112 aaPredicted RBP6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 MOCS1Q9NZB8 636 aa6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 LTBP4Q8N2S1 1624 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms