RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CGRRF1Q99675 332 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 TMEM117Q9H0C3 514 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 RPF1Q9H9Y2 349 aaKnown RBP10.32□□□□□ -0.76
CTSA-208ENST00000485627 KCND1Q9NSA2 647 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 APEX2Q9UBZ4 518 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 GTF2IRD1Q9UHL9 959 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 MYO6Q9UM54 1294 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 FHOD1Q9Y613 1164 aa10.32□□□□□ -0.76
CTSA-208ENST00000485627 KAT6AQ92794 2004 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 TTLL13PA6NNM8 815 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 B4GALT5O43286 388 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 PHACTR2O75167 634 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 GPR32O75388 356 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 OFD1O75665 1012 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 CLSTN1O94985 981 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 SERPING1P05155 500 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 PROZP22891 400 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 AXLP30530 894 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 HNRNPH3P31942 346 aaKnown RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 STAT1P42224 750 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 MCCD1P59942 119 aaPredicted RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 KRT83P78385 493 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 ZNF200P98182 395 aaPredicted RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 BIRC3Q13489 604 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 SPA17Q15506 151 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 DCAF4L1Q3SXM0 396 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 WDR44Q5JSH3 913 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 C1orf220Q5T0J3 134 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 RAD9BQ6WBX8 426 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 PLEKHO2Q8TD55 490 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 CPB2Q96IY4 423 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 FAM81BQ96LP2 452 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 POP1Q99575 1024 aaKnown RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 OSMRQ99650 979 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 CHP1Q99653 195 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 HAPLN2Q9GZV7 340 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 ADAMTS10Q9H324 1103 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 NHEJ1Q9H9Q4 299 aaPredicted RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 PDE11AQ9HCR9 933 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 DNAJC12Q9UKB3 198 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 PPP2R2CQ9Y2T4 447 aa10.31□□□□□ -0.76
CTSA-208ENST00000485627 BZW2Q9Y6E2 419 aaKnown RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 EPN1Q9Y6I3 576 aaPredicted RBP10.31□□□□□ -0.76
CTSA-208ENST00000485627 MOXD2PA6NHM9 499 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 KIF2AO00139 706 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 AKR1B10O60218 316 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 TSPAN1O60635 241 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 IL18RAPO95256 599 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 NDUFA10O95299 355 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 CLTAP09496 248 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 DARSP14868 501 aaKnown RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 ARF4P18085 180 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 HOXC8P31273 242 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 PIK3CAP42336 1068 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 CRYBB1P53674 252 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 MFAP3P55082 362 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 APBA1Q02410 837 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 ARID5AQ03989 594 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 KLHL30Q0D2K2 578 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 MTF1Q14872 753 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 PTPN14Q15678 1187 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 AMHR2Q16671 573 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 EPC2Q52LR7 807 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 EEF1DP3Q658K8 133 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 IQCEQ6IPM2 695 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 NOTUMQ6P988 496 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 WDR59Q6PJI9 974 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 CRELD2Q6UXH1 353 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 TOGARAM2Q6ZUX3 1019 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 SV2AQ7L0J3 742 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 UBE2Q1Q7Z7E8 422 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 VPS36Q86VN1 386 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 CDR2LQ86X02 465 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 WDR49Q8IV35 697 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 TXLNBQ8N3L3 684 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 ARRDC4Q8NCT1 418 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 ANKRD36BP1Q96IX9 119 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 PPP1R13BQ96KQ4 1090 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 NT5C1BQ96P26 610 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 STK33Q9BYT3 514 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 IMPG2Q9BZV3 1241 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 CDT1Q9H211 546 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 PDZD7Q9H5P4 517 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 PTPRHQ9HD43 1115 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 UBE2TQ9NPD8 197 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 TOPORSQ9NS56 1045 aaPredicted RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 RAB20Q9NX57 234 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 AIPL1Q9NZN9 384 aa10.3□□□□□ -0.76
CTSA-208ENST00000485627 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 R3HCC1Q9Y3T6 440 aaKnown RBP10.3□□□□□ -0.76
CTSA-208ENST00000485627 EVPLQ92817 2033 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms