RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 P2RX5Q93086 422 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 NKX2-4Q9H2Z4 354 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 DMAC2Q9NW81 257 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 MRPL42Q9Y6G3 142 aaKnown RBP21.68■■□□□ 1.06
COL6A2-208ENST00000485591 GOLGA8IPA6NC78 632 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 GOLGA8JA6NMD2 632 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 ARHGEF15O94989 841 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 POMCP01189 267 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 CCNE1P24864 410 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 LRRC63Q05C16 580 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 PPP2R3AQ06190 1150 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 HABP4Q5JVS0 413 aaKnown RBP21.67■■□□□ 1.06
COL6A2-208ENST00000485591 FOXR2Q6PJQ5 311 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 BRSK2Q8IWQ3 736 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 CD302Q8IX05 232 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 CLP1Q92989 425 aaKnown RBP21.67■■□□□ 1.06
COL6A2-208ENST00000485591 TIFAQ96CG3 184 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 TSG101Q99816 390 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 CXCL16Q9H2A7 254 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 MIOSQ9NXC5 875 aa21.67■■□□□ 1.06
COL6A2-208ENST00000485591 SOX1O00570 391 aaPredicted RBP21.66■■□□□ 1.06
COL6A2-208ENST00000485591 LINC00271P0C7V0 271 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 KCNE1P15382 129 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 NR2F2P24468 414 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 TAP1Q03518 808 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 RNASELQ05823 741 aaKnown RBP21.66■■□□□ 1.06
COL6A2-208ENST00000485591 DPCR1Q3MIW9 517 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 PPP2R2DQ66LE6 453 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 KLHL10Q6JEL2 608 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 CWH43Q9H720 699 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 SLC28A3Q9HAS3 691 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 RBAKQ9NYW8 714 aaPredicted RBP21.66■■□□□ 1.06
COL6A2-208ENST00000485591 HCSTQ9UBK5 93 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 PLAGL2Q9UPG8 496 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 CTNND2Q9UQB3 1225 aa21.66■■□□□ 1.06
COL6A2-208ENST00000485591 TMEM265A0A087WTH1 108 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 SMIM28A0A1B0GU29 152 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 TRIM49BA6NDI0 452 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 ZNF233A6NK53 670 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 EXOC3O60645 756 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 THP07101 528 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 RPL13P26373 211 aaKnown RBP21.65■■□□□ 1.06
COL6A2-208ENST00000485591 PMS1P54277 932 aaKnown RBP21.65■■□□□ 1.06
COL6A2-208ENST00000485591 DSC1Q08554 894 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 PAK1Q13153 545 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 NAB2Q15742 525 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 SNRNP35Q16560 246 aaKnown RBP21.65■■□□□ 1.06
COL6A2-208ENST00000485591 GLRA4Q5JXX5 417 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 ANKRD40Q6AI12 368 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 SASS6Q6UVJ0 657 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 CBWD2Q8IUF1 395 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 NOC3LQ8WTT2 800 aaKnown RBP21.65■■□□□ 1.06
COL6A2-208ENST00000485591 NELFBQ8WX92 580 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 ZMAT2Q96NC0 199 aaKnown RBP21.65■■□□□ 1.06
COL6A2-208ENST00000485591 PPP1R10Q96QC0 940 aaKnown RBP21.65■■□□□ 1.06
COL6A2-208ENST00000485591 TSPAN18Q96SJ8 248 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 ASB7Q9H672 318 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 DACH1Q9UI36 760 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 RWDD3Q9Y3V2 267 aa21.65■■□□□ 1.06
COL6A2-208ENST00000485591 COL4A4P53420 1690 aaPredicted RBP21.64■■□□□ 1.05
COL6A2-208ENST00000485591 BICDL2A1A5D9 508 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 LACTBL1A8MY62 500 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 DDHD2O94830 711 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 IL18RAPO95256 599 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 LAG3P18627 525 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 TTI2Q6NXR4 508 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 ZNF280BQ86YH2 543 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 ZC3H3Q8IXZ2 948 aaKnown RBP21.64■■□□□ 1.05
COL6A2-208ENST00000485591 SAMD11Q96NU1 681 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 NRDE2Q9H7Z3 1164 aa21.64■■□□□ 1.05
COL6A2-208ENST00000485591 B4GALT3O60512 393 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 LETM1O95202 739 aaPredicted RBP21.63■■□□□ 1.05
COL6A2-208ENST00000485591 ERVK-21P61565 698 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 ADAM9Q13443 819 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 TUSC3Q13454 348 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 SPOUT1Q5T280 376 aaKnown RBP21.63■■□□□ 1.05
COL6A2-208ENST00000485591 COLGALT2Q8IYK4 626 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 FAM212AQ96EL1 285 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 FAM193BQ96PV7 902 aaPredicted RBP21.63■■□□□ 1.05
COL6A2-208ENST00000485591 TGS1Q96RS0 853 aaKnown RBP21.63■■□□□ 1.05
COL6A2-208ENST00000485591 TMEM175Q9BSA9 504 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 AAASQ9NRG9 546 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 SLC38A7Q9NVC3 462 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 RWDD2AQ9UIY3 292 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 DERAQ9Y315 318 aa21.63■■□□□ 1.05
COL6A2-208ENST00000485591 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.63■■□□□ 1.05
COL6A2-208ENST00000485591 PLXNA4Q9HCM2 1894 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 CARNS1A5YM72 827 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 MAPK13O15264 365 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 ZC3H11AO75152 810 aaKnown RBP eCLIP21.62■■□□□ 1.05
COL6A2-208ENST00000485591 CASP4P49662 377 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 WNT7BP56706 349 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 FKBP3Q00688 224 aaKnown RBP21.62■■□□□ 1.05
COL6A2-208ENST00000485591 CYP24A1Q07973 514 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 SURF1Q15526 300 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 STX1AQ16623 288 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 CT47A1Q5JQC4 288 aaPredicted RBP21.62■■□□□ 1.05
COL6A2-208ENST00000485591 CEP135Q66GS9 1140 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 SPRED2Q7Z698 418 aa21.62■■□□□ 1.05
COL6A2-208ENST00000485591 NT5DC4Q86YG4 428 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms