RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TRAPPC10P48553 1259 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 HMGN5P82970 282 aaKnown RBP21.19■□□□□ 0.98
COL27A1-205ENST00000485397 DCAF4L1Q3SXM0 396 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 GLRA4Q5JXX5 417 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 ASCL5Q7RTU5 278 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 DDX19AQ9NUU7 478 aaKnown RBP21.19■□□□□ 0.98
COL27A1-205ENST00000485397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.19■□□□□ 0.98
COL27A1-205ENST00000485397 WNT16Q9UBV4 365 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 CA14Q9ULX7 337 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 NOL7Q9UMY1 257 aaKnown RBP21.19■□□□□ 0.98
COL27A1-205ENST00000485397 NTHL1P78549 312 aa21.18■□□□□ 0.98
COL27A1-205ENST00000485397 ATF7IP2Q5U623 682 aa21.18■□□□□ 0.98
COL27A1-205ENST00000485397 GRASPQ7Z6J2 395 aaPredicted RBP21.18■□□□□ 0.98
COL27A1-205ENST00000485397 KIFAP3Q92845 792 aa21.18■□□□□ 0.98
COL27A1-205ENST00000485397 NXPE3Q969Y0 559 aa21.18■□□□□ 0.98
COL27A1-205ENST00000485397 ZSCAN31Q96LW9 406 aaPredicted RBP21.18■□□□□ 0.98
COL27A1-205ENST00000485397 RTP3Q9BQQ7 232 aa21.18■□□□□ 0.98
COL27A1-205ENST00000485397 ZFHX2Q9C0A1 2572 aaPredicted RBP21.18■□□□□ 0.98
COL27A1-205ENST00000485397 STK25O00506 426 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 C8AP07357 584 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 SRFP11831 508 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 FSHRP23945 695 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 TOB1P50616 345 aaPredicted RBP21.17■□□□□ 0.98
COL27A1-205ENST00000485397 EFNA5P52803 228 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 ELAVL2Q12926 359 aaKnown RBP21.17■□□□□ 0.98
COL27A1-205ENST00000485397 FRMD5Q7Z6J6 570 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 CCDC105Q8IYK2 499 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 DTWD2Q8NBA8 298 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 SNX29Q8TEQ0 813 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 PPP1R10Q96QC0 940 aaKnown RBP21.17■□□□□ 0.98
COL27A1-205ENST00000485397 KIF2CQ99661 725 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 PCDHB6Q9Y5E3 794 aa21.17■□□□□ 0.98
COL27A1-205ENST00000485397 DOCK6Q96HP0 2047 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 PP2D1A8MPX8 630 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 ANHXE9PGG2 379 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 E9PMD0 336 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 K7ERI5 159 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 PTGDRQ13258 359 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 HTR4Q13639 388 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 PDIA5Q14554 519 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 PPM1LQ5SGD2 360 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 LIN9Q5TKA1 542 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 CD300LGQ6UXG3 332 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.16■□□□□ 0.98
COL27A1-205ENST00000485397 CEP120Q8N960 986 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 IGSF22Q8N9C0 903 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 GPR152Q8TDT2 470 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 RPP25Q9BUL9 199 aaKnown RBP21.16■□□□□ 0.98
COL27A1-205ENST00000485397 GOLGA2P5Q9HBQ8 144 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 SH2B1Q9NRF2 756 aaPredicted RBP21.16■□□□□ 0.98
COL27A1-205ENST00000485397 TNFSF13BQ9Y275 285 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 NUMBLQ9Y6R0 609 aa21.16■□□□□ 0.98
COL27A1-205ENST00000485397 PRR23AA6NEV1 266 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 CCDC169A6NNP5 214 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 CCL16O15467 120 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 B3GAT3O94766 335 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 HNRNPA1P09651 372 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL27A1-205ENST00000485397 FGFR3P22607 806 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 U2AF2P26368 475 aaKnown RBP eCLIP21.15■□□□□ 0.981e-7■□□□□ 8.7
COL27A1-205ENST00000485397 OR1D2P34982 312 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 CLCNKBP51801 687 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 PEX3P56589 373 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 IL17AQ16552 155 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 DCLRE1AQ6PJP8 1040 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 RSPO2Q6UXX9 243 aaPredicted RBP21.15■□□□□ 0.98
COL27A1-205ENST00000485397 DAW1Q8N136 415 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 POLIQ9UNA4 740 aa21.15■□□□□ 0.98
COL27A1-205ENST00000485397 VWA8A3KMH1 1905 aa21.14■□□□□ 0.98
COL27A1-205ENST00000485397 TMEM189-UBE2V1I3L0A0 370 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 I3L4J1 428 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 RFX1P22670 979 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 CDC25AP30304 524 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 BRCC3P46736 316 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 NPTX2P47972 431 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 RAB33AQ14088 237 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 ANGPT1Q15389 498 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 PDXDC1Q6P996 788 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 SLC7A14Q8TBB6 771 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 ACO2Q99798 780 aaKnown RBP21.14■□□□□ 0.97
COL27A1-205ENST00000485397 CDT1Q9H211 546 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 TBC1D17Q9HA65 648 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 MTRRQ9UBK8 725 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 CDH7Q9ULB5 785 aa21.14■□□□□ 0.97
COL27A1-205ENST00000485397 PTPRZ1P23471 2315 aaPredicted RBP21.13■□□□□ 0.97
COL27A1-205ENST00000485397 SMIM28A0A1B0GU29 152 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 HIP1RO75146 1068 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 TKTP29401 623 aaKnown RBP21.13■□□□□ 0.97
COL27A1-205ENST00000485397 OSTNP61366 133 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 SOX4Q06945 474 aaPredicted RBP21.13■□□□□ 0.97
COL27A1-205ENST00000485397 UPP1Q16831 310 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 AXDND1Q5T1B0 1012 aaPredicted RBP21.13■□□□□ 0.97
COL27A1-205ENST00000485397 PARM1Q6UWI2 310 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 TAS1R3Q7RTX0 852 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 APBB1IPQ7Z5R6 666 aaPredicted RBP21.13■□□□□ 0.97
COL27A1-205ENST00000485397 C3orf58Q8NDZ4 430 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 FGF14Q92915 247 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 RUSC1Q9BVN2 902 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 TARS2Q9BW92 718 aaKnown RBP21.13■□□□□ 0.97
COL27A1-205ENST00000485397 RAB34Q9BZG1 259 aa21.13■□□□□ 0.97
COL27A1-205ENST00000485397 PTPRHQ9HD43 1115 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms