RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 ZNF318Q5VUA4 2279 aa17.44■□□□□ 0.38
SIK3-211ENST00000485363 CCDC195A0A1B0GUA6 201 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 SFI1A8K8P3 1242 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 SLC16A4O15374 487 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 PLA2G4BP0C869 781 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 PLS3P13797 630 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 GRM5P41594 1212 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 SMTNP53814 917 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 SLC12A3P55017 1021 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 STRN3Q13033 797 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 CUL4AQ13619 759 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 TMEM119Q4V9L6 283 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 GLRA4Q5JXX5 417 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 RTP2Q5QGT7 225 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 FAM171A1Q5VUB5 890 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 OTOP3Q7RTS5 596 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 TAS1R3Q7RTX0 852 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 CEP57Q86XR8 500 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 GLYCTKQ8IVS8 523 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 SUGP1Q8IWZ8 645 aaKnown RBP17.43■□□□□ 0.38
SIK3-211ENST00000485363 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 UROC1Q96N76 676 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 TCHPQ9BT92 498 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 TTPALQ9BTX7 342 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
SIK3-211ENST00000485363 PTPRHQ9HD43 1115 aa17.43■□□□□ 0.38
SIK3-211ENST00000485363 MUC6Q6W4X9 2439 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 TGM5O43548 720 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 SPATA31D3P0C874 917 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 MCF2P10911 925 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 RPL17P18621 184 aaKnown RBP17.42■□□□□ 0.38
SIK3-211ENST00000485363 PDCP20941 246 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 UBA7P41226 1012 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 PDXDC1Q6P996 788 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 PRSS55Q6UWB4 352 aaPredicted RBP17.42■□□□□ 0.38
SIK3-211ENST00000485363 SPATA31D4Q6ZUB0 917 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 UBALD2Q8IYN6 164 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 CEP120Q8N960 986 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 PIK3R5Q8WYR1 880 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 ASIC4Q96FT7 647 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 PPP1R10Q96QC0 940 aaKnown RBP17.42■□□□□ 0.38
SIK3-211ENST00000485363 RHOBTB2Q9BYZ6 727 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 LIMD1Q9UGP4 676 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 CITO14578 2027 aa17.42■□□□□ 0.38
SIK3-211ENST00000485363 SMIM28A0A1B0GU29 152 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 TMEM189-UBE2V1I3L0A0 370 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 B3GAT3O94766 335 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 BRD1O95696 1058 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 MYBP10242 640 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 PROZP22891 400 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 OSTNP61366 133 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 LILRA6Q6PI73 481 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 DCLRE1AQ6PJP8 1040 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 MPZL3Q6UWV2 235 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 FBXL6Q8N531 539 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 ACAP3Q96P50 834 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 ZDHHC7Q9NXF8 308 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 LARSQ9P2J5 1176 aaKnown RBP17.41■□□□□ 0.38
SIK3-211ENST00000485363 WDFY4Q6ZS81 3184 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 VWA8A3KMH1 1905 aa17.41■□□□□ 0.38
SIK3-211ENST00000485363 VPS37CA5D8V6 355 aaPredicted RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 H0YCG3 227 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 RFPL2O75678 378 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 ASGR2P07307 311 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 LONP1P36776 959 aaKnown RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 CLCNKBP51801 687 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 PSMD5Q16401 504 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 UPP1Q16831 310 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 XKR4Q5GH76 650 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 ALKAL1Q6UXT8 129 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 LNX1Q8TBB1 728 aaPredicted RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 SMG7Q92540 1137 aaKnown RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 STAMQ92783 540 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 PIDD1Q9HB75 910 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 WDR6Q9NNW5 1121 aaKnown RBP17.4■□□□□ 0.38
SIK3-211ENST00000485363 SLC38A7Q9NVC3 462 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 ODF2LQ9ULJ1 636 aa17.4■□□□□ 0.38
SIK3-211ENST00000485363 NPHP3-ACAD11A0A0J9YXS1 232 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 ABLIM1O14639 778 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 TOM1L1O75674 476 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 PAPLNO95428 1278 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
SIK3-211ENST00000485363 HARSP12081 509 aaKnown RBP17.39■□□□□ 0.37
SIK3-211ENST00000485363 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
SIK3-211ENST00000485363 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 RASSF8Q8NHQ8 419 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 ZNF707Q96C28 371 aaPredicted RBP17.39■□□□□ 0.37
SIK3-211ENST00000485363 DDX27Q96GQ7 796 aaKnown RBP17.39■□□□□ 0.37
SIK3-211ENST00000485363 SNX27Q96L92 541 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 CLSTN3Q9BQT9 956 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 PRKD2Q9BZL6 878 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 GOLGA2P5Q9HBQ8 144 aa17.39■□□□□ 0.37
SIK3-211ENST00000485363 ANKFY1Q9P2R3 1169 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms