RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 GRASPQ7Z6J2 395 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-227ENST00000485102 GLYCTKQ8IVS8 523 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 FGF13Q92913 245 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 NACC1Q96RE7 527 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 POLR3CQ9BUI4 534 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-227ENST00000485102 RPP25Q9BUL9 199 aaKnown RBP14.39□□□□□ -0.11
HDAC6-227ENST00000485102 KCNH3Q9ULD8 1083 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 MYH15Q9Y2K3 1946 aa14.39□□□□□ -0.11
HDAC6-227ENST00000485102 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 BTBD18B2RXH4 712 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 ACKR2O00590 384 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
HDAC6-227ENST00000485102 XYLBO75191 536 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 KIF4AO95239 1232 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 C8AP07357 584 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 FGFR3P22607 806 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 MAGEA9P43362 315 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 PFKPQ01813 784 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 MAPK6Q16659 721 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 PPM1LQ5SGD2 360 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-227ENST00000485102 CATSPER3Q86XQ3 398 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-227ENST00000485102 KCNG4Q8TDN1 519 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 RABGGTAQ92696 567 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 PDZD7Q9H5P4 517 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 GPRC5CQ9NQ84 441 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 SNTG2Q9NY99 539 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 FBXO4Q9UKT5 387 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 R4GN57 208 aa14.38□□□□□ -0.11
HDAC6-227ENST00000485102 TPRP12270 2363 aaKnown RBP14.38□□□□□ -0.11
HDAC6-227ENST00000485102 MIA3Q5JRA6 1907 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 CASTOR2A6NHX0 329 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 WNT7AO00755 349 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 RECQL4O94761 1208 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 CYP11B2P19099 503 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 ATP2B1P20020 1258 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 MUTP22033 750 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 RPA1P27694 616 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 NAMPTP43490 491 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 PRPF4BQ13523 1007 aaKnown RBP14.37□□□□□ -0.11
HDAC6-227ENST00000485102 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
HDAC6-227ENST00000485102 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 RUBCNQ92622 972 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 GTF3C6Q969F1 213 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 ADPGKQ9BRR6 497 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 CCDC113Q9H0I3 377 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 AVENQ9NQS1 362 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-227ENST00000485102 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 BACE2Q9Y5Z0 518 aa14.37□□□□□ -0.11
HDAC6-227ENST00000485102 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 NCOR2Q9Y618 2525 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 FRYLO94915 3013 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 A0A087WWV3 80 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 POTEMA6NI47 508 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 ADAM12O43184 909 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 ORC2Q13416 577 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-227ENST00000485102 PUM1Q14671 1186 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC6-227ENST00000485102 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 MLF2Q15773 248 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-227ENST00000485102 SLC44A4Q53GD3 710 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 SPECC1Q5M775 1068 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 AXDND1Q5T1B0 1012 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-227ENST00000485102 CEP57Q86XR8 500 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 NSUN7Q8NE18 718 aaKnown RBP14.36□□□□□ -0.11
HDAC6-227ENST00000485102 RMDN1Q96DB5 314 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 NELL2Q99435 816 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 FOXQ1Q9C009 403 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 TMEM60Q9H2L4 133 aa14.36□□□□□ -0.11
HDAC6-227ENST00000485102 MED24O75448 989 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 PRKCBP05771 671 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 OR1D2P34982 312 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 EFNA5P52803 228 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 NTHL1P78549 312 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 SNW1Q13573 536 aaKnown RBP14.35□□□□□ -0.11
HDAC6-227ENST00000485102 ME3Q16798 604 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 DCAF4L1Q3SXM0 396 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 CD300LGQ6UXG3 332 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 MAEAQ7L5Y9 396 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 NOSTRINQ8IVI9 506 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 NPAS3Q8IXF0 933 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 ITFG1Q8TB96 612 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 SLC7A14Q8TBB6 771 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 HASPINQ8TF76 798 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 BSNDQ8WZ55 320 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 NELL1Q92832 810 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 CLDN23Q96B33 292 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 UROC1Q96N76 676 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
HDAC6-227ENST00000485102 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 CXCL16Q9H2A7 254 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 DLL3Q9NYJ7 618 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 GDE1Q9NZC3 331 aa14.35□□□□□ -0.11
HDAC6-227ENST00000485102 DNMT3BQ9UBC3 853 aaKnown RBP14.35□□□□□ -0.11
HDAC6-227ENST00000485102 SPTLC1O15269 473 aa14.34□□□□□ -0.11
HDAC6-227ENST00000485102 CCL16O15467 120 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms