RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 CYB5R4Q7L1T6 521 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 ELOA2Q8IYF1 753 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 GLT1D1Q96MS3 346 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 JAKMIP1Q96N16 626 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FAM210AQ96ND0 272 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 INPP4AQ96PE3 977 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 RMDN3Q96TC7 470 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NOC4LQ9BVI4 516 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 BCO2Q9BYV7 579 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 UBE2OQ9C0C9 1292 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 WDR12Q9GZL7 423 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 KAT14Q9H8E8 782 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 LY9Q9HBG7 655 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 PXMP2Q9NR77 195 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 KIAA0100Q14667 2235 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 A0A0B4J203 849 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 PRDM1O75626 825 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TGDSO95455 350 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 CYP11A1P05108 521 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TNNT3P45378 269 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FXR2P51116 673 aaKnown RBP eCLIP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 ADAM17P78536 824 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 CNTN2Q02246 1040 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 BAATQ14032 418 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 HSP90B2PQ58FF3 399 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FAM209AQ5JX71 171 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TMEM240Q5SV17 173 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 HECTD3Q5T447 861 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FIP1L1Q6UN15 594 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NFXL1Q6ZNB6 911 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 KCTD1Q719H9 257 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TLK2Q86UE8 772 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NLRP14Q86W24 1093 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 FBXO11Q86XK2 927 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 TMEM199Q8N511 208 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 PPP1R14CQ8TAE6 165 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 CRYGNQ8WXF5 182 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 KCTD13Q8WZ19 329 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 HDAC2Q92769 488 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 KIAA1191Q96A73 305 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 AP5M1Q9H0R1 490 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 SUPT16HQ9Y5B9 1047 aaKnown RBP5.82□□□□□ -1.48
CCDC39-205ENST00000485055 PCDHGB5Q9Y5G0 923 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 NFASCO94856 1347 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 LOXHD1Q8IVV2 1947 aa5.82□□□□□ -1.48
CCDC39-205ENST00000485055 SPATA31C2B4DYI2 1134 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SH2B2O14492 632 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 KIF20AO95235 890 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 GH1P01241 217 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 POLBP06746 335 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 ABCB4P21439 1286 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 GRK6P43250 576 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 MCM2P49736 904 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SLC12A2P55011 1212 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 POLR2FP61218 127 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 RPS6P62753 249 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TMED1Q13445 227 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 KRT32Q14532 448 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PLS1Q14651 629 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TTLL4Q14679 1199 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SLC9A5Q14940 896 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SMAD1Q15797 465 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 STXBP2Q15833 593 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PRAMEF19Q5SWL8 479 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TTBK2Q6IQ55 1244 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 CCDC155Q8N6L0 562 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 MSANTD4Q8NCY6 345 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 NKD1Q969G9 470 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TRIM63Q969Q1 353 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 CTAGE1Q96RT6 745 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 LBHD1Q9BQE6 289 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 RUSC1Q9BVN2 902 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 IL25Q9H293 177 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 STARD7Q9NQZ5 370 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 RBM28Q9NW13 759 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 NKIRAS2Q9NYR9 191 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PPARGC1AQ9UBK2 798 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 GPR34Q9UPC5 381 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PCDHA11Q9Y5I1 949 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 MYADML2A6NDP7 307 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 NFIBO00712 420 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PPP1R11O60927 126 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PRKD3O94806 890 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 CYP3A4P08684 503 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 CCDC159P0C7I6 412 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 HSD3B1P14060 373 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 CPEP16870 476 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 MCM4P33991 863 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 AP1B1Q10567 949 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 ITGA7Q13683 1181 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 RAB30Q15771 203 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 QRICH1Q2TAL8 776 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 RRP12Q5JTH9 1297 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TAF3Q5VWG9 929 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 C16orf59Q7L2K0 433 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SLC44A2Q8IWA5 706 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 GPR152Q8TDT2 470 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms