RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
MSH5-216ENST00000484309 WEE2P0C1S8 567 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 MYBP10242 640 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 MCF2P10911 925 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 KLRC2P26717 231 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 STAT6P42226 847 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 ZNF131P52739 623 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 YARSP54577 528 aaKnown RBP13.45□□□□□ -0.26
MSH5-216ENST00000484309 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSH5-216ENST00000484309 TMEM184AQ6ZMB5 413 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
MSH5-216ENST00000484309 C12orf76Q8N812 135 aaPredicted RBP13.45□□□□□ -0.26
MSH5-216ENST00000484309 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 CASP10Q92851 521 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 KLHL5Q96PQ7 755 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 HAPLN2Q9GZV7 340 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 MRPL17Q9NRX2 175 aaKnown RBP13.45□□□□□ -0.26
MSH5-216ENST00000484309 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
MSH5-216ENST00000484309 MYO10Q9HD67 2058 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 MYMKA6NI61 221 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 MEFVO15553 781 aaPredicted RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 TOM1L1O75674 476 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 EFEMP2O95967 443 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 SP100P23497 879 aaPredicted RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 SOX4Q06945 474 aaPredicted RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 RARS2Q5T160 578 aaKnown RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 CCDC73Q6ZRK6 1079 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 SFR1Q86XK3 245 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 ADHFE1Q8IWW8 467 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 TMEM130Q8N3G9 435 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 DDX12PQ92771 950 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 STAMQ92783 540 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 CHAMP1Q96JM3 812 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 SNX27Q96L92 541 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 ACAP3Q96P50 834 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 FIZ1Q96SL8 496 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 EMILIN2Q9BXX0 1053 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 S1PR5Q9H228 398 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 EPHX3Q9H6B9 360 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 TBC1D7Q9P0N9 293 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 KCNG1Q9UIX4 513 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 TBX20Q9UMR3 447 aa13.44□□□□□ -0.26
MSH5-216ENST00000484309 MORC2Q9Y6X9 1032 aaPredicted RBP13.44□□□□□ -0.26
MSH5-216ENST00000484309 SMIM28A0A1B0GU29 152 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 H0YCG3 227 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 HNRNPDLO14979 420 aaKnown RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 TEX28O15482 410 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 CLDN3O15551 220 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 LILRB3O75022 631 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 YEATS4O95619 227 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 TNFSF9P41273 254 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 LIG4P49917 911 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 CLCNKBP51801 687 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 SPAG1Q07617 926 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 RTP2Q5QGT7 225 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 FAM171A1Q5VUB5 890 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 KIAA0319Q5VV43 1072 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 PRSS55Q6UWB4 352 aaPredicted RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 ZPBP2Q6X784 338 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 CEP57Q86XR8 500 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 RIN2Q8WYP3 895 aaPredicted RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 ZMAT2Q96NC0 199 aaKnown RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 IKZF4Q9H2S9 585 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 TOPORSQ9NS56 1045 aaPredicted RBP13.43□□□□□ -0.26
MSH5-216ENST00000484309 PRKAG3Q9UGI9 489 aa13.43□□□□□ -0.26
MSH5-216ENST00000484309 MUC3AQ02505 3323 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SF3B1O75533 1304 aaKnown RBP eCLIP13.42□□□□□ -0.26
MSH5-216ENST00000484309 TISP43B9A030 160 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 I3L4J1 428 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 CUTAO60888 179 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 PPP6R2O75170 966 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 BRD1O95696 1058 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SPATA31D3P0C874 917 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 CXCL8P10145 99 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 IDEP14735 1019 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 CLCN4P51793 760 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 DSG1Q02413 1049 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 MCL1Q07820 350 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 CBX2Q14781 532 aaPredicted RBP13.42□□□□□ -0.26
MSH5-216ENST00000484309 USP41Q3LFD5 358 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 ZBTB41Q5SVQ8 909 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SLC39A4Q6P5W5 647 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SHC4Q6S5L8 630 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SPATA31D4Q6ZUB0 917 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 C3orf58Q8NDZ4 430 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 SUSD6Q92537 303 aa13.42□□□□□ -0.26
MSH5-216ENST00000484309 C18orf25Q96B23 403 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms