RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MRPS23Q9Y3D9 190 aaKnown RBP5.48□□□□□ -1.53
SSBP1-211ENST00000484178 NRXN3Q9Y4C0 1643 aa5.48□□□□□ -1.53
SSBP1-211ENST00000484178 CEP170BQ9Y4F5 1589 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 COL15A1P39059 1388 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 CEMIPQ8WUJ3 1361 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 SHTN1A0MZ66 631 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 CCDC66A2RUB6 948 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 FAM83GA6ND36 823 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 RASGRP1O95267 797 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 SCGB1D2O95969 90 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 TPM1P09493 284 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 IFIT2P09913 472 aaKnown RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 ZNF888P0CJ79 500 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 GLRBP48167 497 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 AK2P54819 239 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 GPR85P60893 370 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 RRS1Q15050 365 aaKnown RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 LRRC41Q15345 812 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 ZMAT1Q5H9K5 638 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 NAA16Q6N069 864 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 DPP8Q6V1X1 898 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 TSHZ1Q6ZSZ6 1077 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 MCM10Q7L590 875 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 POLNQ7Z5Q5 900 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 NECAB2Q7Z6G3 386 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 LRRTM3Q86VH5 581 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 KCNH5Q8NCM2 988 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 DNAAF4Q8WXU2 420 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 MAP4K1Q92918 833 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 SCYL1Q96KG9 808 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 MRPL4Q9BYD3 311 aaKnown RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 ZNF341Q9BYN7 854 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 CLSTN2Q9H4D0 955 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 ARHGEF4Q9NR80 690 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 OAZ3Q9UMX2 235 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 MTMR6Q9Y217 621 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 EXOC6BQ9Y2D4 811 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 LRRFIP2Q9Y608 721 aaKnown RBP5.47□□□□□ -1.53
SSBP1-211ENST00000484178 UTYO14607 1347 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 MAP3K19Q56UN5 1328 aa5.47□□□□□ -1.53
SSBP1-211ENST00000484178 DLG5Q8TDM6 1919 aa5.46□□□□□ -1.53
SSBP1-211ENST00000484178 MYO5BQ9ULV0 1848 aa5.46□□□□□ -1.53
SSBP1-211ENST00000484178 CRYBG1Q9Y4K1 1723 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 FAM47E-STBD1D6RA91 191 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 GOLGA6L19H0YKK7 550 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 PLSCR1O15162 318 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 KATNA1O75449 491 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 COL6A2P12110 1019 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 CPEP16870 476 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 CR2P20023 1033 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 CASTP20810 708 aaKnown RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 GJB2P29033 226 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 RBM6P78332 1123 aaKnown RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 DPTQ07507 201 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 KRTAP1-1Q07627 177 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 ABHD18Q0P651 414 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 DBPQ10586 325 aaPredicted RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 DUSP8Q13202 625 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 OS9Q13438 667 aaPredicted RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 NFYCQ13952 458 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 DCTN1Q14203 1278 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 HLTFQ14527 1009 aaKnown RBP eCLIP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 NECTIN1Q15223 517 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 NTRK3Q16288 839 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 FAM209AQ5JX71 171 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 BLOC1S2Q6QNY1 142 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 MAMDC4Q6UXC1 1216 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 PPP1R42Q7Z4L9 355 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 IFNL3Q8IZI9 196 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 CCDC112Q8NEF3 446 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 ZNF396Q96N95 335 aaPredicted RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 TACO1Q9BSH4 297 aaKnown RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 AARSD1Q9BTE6 412 aaKnown RBP5.46□□□□□ -1.54
SSBP1-211ENST00000484178 TSPYL1Q9H0U9 437 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 TNMDQ9H2S6 317 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 ADAMTS13Q76LX8 1427 aa5.46□□□□□ -1.54
SSBP1-211ENST00000484178 XRN1Q8IZH2 1706 aaKnown RBP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 JCADQ9P266 1359 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 FAM208AQ9UK61 1670 aaKnown RBP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 PNMA6EA0A0J9YXQ4 647 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 WNT9AO14904 365 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 ATP8B1O43520 1251 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 AKAP10O43572 662 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 NARSO43776 548 aaKnown RBP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 SOD2P04179 222 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 KRT18P05783 430 aaKnown RBP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 ETV4P43268 484 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 KCNJ4P48050 445 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 RAB27AP51159 221 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 NEK2P51955 445 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 PTH1RQ03431 593 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 G3BP1Q13283 466 aaKnown RBP eCLIP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 STX1AQ16623 288 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 NRN1LQ496H8 165 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 PLEKHO1Q53GL0 409 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 BEND3Q5T5X7 828 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 KCNT2Q6UVM3 1135 aa5.45□□□□□ -1.54
SSBP1-211ENST00000484178 DDX46Q7L014 1031 aaKnown RBP5.45□□□□□ -1.54
SSBP1-211ENST00000484178 CXXC5Q7LFL8 322 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms