RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 SLC27A1Q6PCB7 646 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 ZNF365Q70YC5 407 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 RDH13Q8NBN7 331 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 PCMTD1Q96MG8 357 aaPredicted RBP15.17■□□□□ 0.02
SMAD9-204ENST00000483941 NECAB3Q96P71 396 aaPredicted RBP15.17■□□□□ 0.02
SMAD9-204ENST00000483941 ERGIC2Q96RQ1 377 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 PPP1R16BQ96T49 567 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 MTIF3Q9H2K0 278 aaKnown RBP15.17■□□□□ 0.02
SMAD9-204ENST00000483941 NKX2-4Q9H2Z4 354 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
SMAD9-204ENST00000483941 DAAM1Q9Y4D1 1078 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 CDY2AQ9Y6F7 541 aa15.17■□□□□ 0.02
SMAD9-204ENST00000483941 EVPLQ92817 2033 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 RPS6KA5O75582 802 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 IL18RAPO95256 599 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 PARNO95453 639 aaKnown RBP15.16■□□□□ 0.02
SMAD9-204ENST00000483941 CLTAP09496 248 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 ARF4P18085 180 aaPredicted RBP15.16■□□□□ 0.02
SMAD9-204ENST00000483941 CYP24A1Q07973 514 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 PSMD6Q15008 389 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 AMHR2Q16671 573 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 HS1BP3Q53T59 392 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 TMC6Q7Z403 805 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 CD302Q8IX05 232 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 SLC35C1Q96A29 364 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
SMAD9-204ENST00000483941 TSPAN18Q96SJ8 248 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 TRIM6Q9C030 488 aaPredicted RBP15.16■□□□□ 0.02
SMAD9-204ENST00000483941 SLC28A3Q9HAS3 691 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
SMAD9-204ENST00000483941 AGPAT5Q9NUQ2 364 aa15.16■□□□□ 0.02
SMAD9-204ENST00000483941 RBAKQ9NYW8 714 aaPredicted RBP15.16■□□□□ 0.02
SMAD9-204ENST00000483941 GOLGA8IPA6NC78 632 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 GOLGA8JA6NMD2 632 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 TISP43B9A030 160 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 RBL2Q08999 1139 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 TSR1Q2NL82 804 aaKnown RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 CBWD2Q8IUF1 395 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 FAM126BQ8IXS8 530 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 MICALL1Q8N3F8 863 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 CCDC150Q8NCX0 1101 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 ZNF397Q8NF99 534 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 PARD3BQ8TEW8 1205 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 CCDC94Q9BW85 323 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 EDEM3Q9BZQ6 932 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 IKZF4Q9H2S9 585 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 PDZD7Q9H5P4 517 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 RPF1Q9H9Y2 349 aaKnown RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 YBX2Q9Y2T7 364 aaKnown RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 HCN4Q9Y3Q4 1203 aa15.15■□□□□ 0.02
SMAD9-204ENST00000483941 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-204ENST00000483941 TEX33O43247 280 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 B4GALT5O43286 388 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 B4GALT4O60513 344 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 IQCF3P0C7M6 154 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 SKIP12755 728 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 CYP2C18P33260 490 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 PBX1P40424 430 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 FMO5P49326 533 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 YARSP54577 528 aaKnown RBP15.14■□□□□ 0.01
SMAD9-204ENST00000483941 MGAT3Q09327 533 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 EXOC3L4Q17RC7 722 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 KRT39Q6A163 491 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 NT5DC4Q86YG4 428 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 CNGA4Q8IV77 575 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 FMNL3Q8IVF7 1028 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 BRSK2Q8IWQ3 736 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 SPC24Q8NBT2 197 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 ZBTB45Q96K62 511 aaPredicted RBP15.14■□□□□ 0.01
SMAD9-204ENST00000483941 FAM81BQ96LP2 452 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 ACAP3Q96P50 834 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 CDT1Q9H211 546 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 PLEKHA5Q9HAU0 1116 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 INTS13Q9NVM9 706 aa15.14■□□□□ 0.01
SMAD9-204ENST00000483941 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
SMAD9-204ENST00000483941 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
SMAD9-204ENST00000483941 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 ABLIM1O14639 778 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 CHRNA1P02708 482 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
SMAD9-204ENST00000483941 CKBP12277 381 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 BMP1P13497 986 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 TNNI1P19237 187 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 TRIM21P19474 475 aaKnown RBP15.13■□□□□ 0.01
SMAD9-204ENST00000483941 RFX1P22670 979 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 GRM5P41594 1212 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 ACOT2P49753 483 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 CLDN10P78369 228 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 TFF2Q03403 129 aa15.13■□□□□ 0.01
SMAD9-204ENST00000483941 PAK2Q13177 524 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms