RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ZSCAN32Q9NX65 697 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 ZDHHC9Q9Y397 364 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SNTNA6NMZ2 147 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 POU5F1BQ06416 359 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 GALNT17Q6IS24 598 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 CRELD2Q6UXH1 353 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 COL23A1Q86Y22 540 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 ADSSL1Q8N142 457 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 CEP95Q96GE4 821 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 TMEM237Q96Q45 408 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 MAP4K1Q92918 833 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SRP72O76094 671 aaKnown RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SOX11P35716 441 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 GALK1P51570 392 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 RHPN2Q8IUC4 686 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 P3H2Q8IVL5 708 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 RMND5BQ96G75 393 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 TLR7Q9NYK1 1049 aaKnown RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 COPG2Q9UBF2 871 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 MYRFQ9Y2G1 1151 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PSMD14O00487 310 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 KRT36O76013 467 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 DGUOKQ16854 277 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PACSIN1Q9BY11 444 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 HDHD2Q9H0R4 259 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SOS2Q07890 1332 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PHF2O75151 1096 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SASH3O75995 380 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 LDHBP07195 334 aaKnown RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SNAP25P60880 206 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 COX10Q12887 443 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 USP4Q13107 963 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 SPEF1Q9Y4P9 236 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 KDM5DQ9BY66 1539 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 GIMAP8Q8ND71 665 aaPredicted RBP10.78□□□□□ -0.68
COL12A1-207ENST00000483888 GGA2Q9UJY4 613 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 PRAG1Q86YV5 1406 aa10.78□□□□□ -0.68
COL12A1-207ENST00000483888 LGR5O75473 907 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 PLCG1P19174 1290 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 PRCPP42785 496 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 SLC1A4P43007 532 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 ARSEP51690 589 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 NSUN2Q08J23 767 aaKnown RBP eCLIP10.77□□□□□ -0.68
COL12A1-207ENST00000483888 SPANXN2Q5MJ10 180 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 PERM1Q5SV97 790 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 MARK2Q7KZI7 788 aaKnown RBP10.77□□□□□ -0.68
COL12A1-207ENST00000483888 AFAP1Q8N556 730 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 DIS3LQ8TF46 1054 aaKnown RBP10.77□□□□□ -0.68
COL12A1-207ENST00000483888 JMJD4Q9H9V9 463 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 ZFYVE9O95405 1425 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 PIPSLA2A3N6 862 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 NEK5Q6P3R8 708 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 LAYNQ6UX15 382 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 RBM44Q6ZP01 1051 aaKnown RBP10.77□□□□□ -0.68
COL12A1-207ENST00000483888 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.68
COL12A1-207ENST00000483888 DENND6AQ8IWF6 608 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 ABCF3Q9NUQ8 709 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 TOP2BQ02880 1626 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 NUP62P37198 522 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-207ENST00000483888 MMGT1Q8N4V1 131 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 OLFM1Q99784 485 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.68
COL12A1-207ENST00000483888 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 PHGDHO43175 533 aaKnown RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 HADHAP40939 763 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 CHN2P52757 468 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SYDE1Q6ZW31 735 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SZRD1Q7Z422 152 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 ZNF804AQ7Z570 1209 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 TTC8Q8TAM2 541 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 BHMTQ93088 406 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 HSPBP1Q9NZL4 362 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SEL1LQ9UBV2 794 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 GDAQ9Y2T3 454 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 RPS6KA5O75582 802 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 TYK2P29597 1187 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 PNMA8CA0A1B0GUJ8 204 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 SOX5P35711 763 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 KRT72Q14CN4 511 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 RBBP7Q16576 425 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 VPS39Q96JC1 886 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 KLHL32Q96NJ5 620 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 BTBD3Q9Y2F9 522 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 MROH7Q68CQ1 1323 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 LGALS3BPQ08380 585 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 CSTF3Q12996 717 aaKnown RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 ARL6IP4Q66PJ3 421 aaKnown RBP10.77□□□□□ -0.69
COL12A1-207ENST00000483888 PCDH12Q9NPG4 1184 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 MYH11P35749 1972 aa10.77□□□□□ -0.69
COL12A1-207ENST00000483888 LOC100653049A0A140TA62 436 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms