RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 VWA8A3KMH1 1905 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 CASTOR2A6NHX0 329 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 KIF4AO95239 1232 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 BRD1O95696 1058 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 GRM5P41594 1212 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 XKR4Q5GH76 650 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 LARP1BQ659C4 914 aaKnown RBP21.8■■□□□ 1.08
HPS4-213ENST00000483631 BRAPQ7Z569 592 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 STAMQ92783 540 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 KCNN1Q92952 543 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 PPP1R10Q96QC0 940 aaKnown RBP21.8■■□□□ 1.08
HPS4-213ENST00000483631 PAAF1Q9BRP4 392 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 CCDC94Q9BW85 323 aaPredicted RBP21.8■■□□□ 1.08
HPS4-213ENST00000483631 POLD4Q9HCU8 107 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 WDR6Q9NNW5 1121 aaKnown RBP21.8■■□□□ 1.08
HPS4-213ENST00000483631 USP20Q9Y2K6 914 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 GDAQ9Y2T3 454 aa21.8■■□□□ 1.08
HPS4-213ENST00000483631 DOCK8Q8NF50 2099 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 CCDC195A0A1B0GUA6 201 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 VWA3AA6NCI4 1184 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 TGM5O43548 720 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 PROZP22891 400 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 NUBP1P53384 320 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 YARSP54577 528 aaKnown RBP21.79■■□□□ 1.08
HPS4-213ENST00000483631 CDK5RAP3Q96JB5 506 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 PNMA5Q96PV4 448 aa21.79■■□□□ 1.08
HPS4-213ENST00000483631 MCF2P10911 925 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 PLS3P13797 630 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 SCP2P22307 547 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 SMTNP53814 917 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 SLC12A3P55017 1021 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 ZNF568Q3ZCX4 644 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 TMEM119Q4V9L6 283 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 RTP2Q5QGT7 225 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 FAM171A1Q5VUB5 890 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 DCLRE1AQ6PJP8 1040 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 ALKAL1Q6UXT8 129 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.78■■□□□ 1.08
HPS4-213ENST00000483631 TAS1R3Q7RTX0 852 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 B3GALT6Q96L58 329 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 CDT1Q9H211 546 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 SLC38A7Q9NVC3 462 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 LIMD1Q9UGP4 676 aa21.78■■□□□ 1.08
HPS4-213ENST00000483631 CACNA1HO95180 2353 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 H0YCG3 227 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 MPZL3Q6UWV2 235 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 PALB2Q86YC2 1186 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 LNX1Q8TBB1 728 aaPredicted RBP21.77■■□□□ 1.08
HPS4-213ENST00000483631 RABGGTAQ92696 567 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 DDX27Q96GQ7 796 aaKnown RBP21.77■■□□□ 1.08
HPS4-213ENST00000483631 PRKD2Q9BZL6 878 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 CXCL16Q9H2A7 254 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 IGSF9Q9P2J2 1179 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 CACNG4Q9UBN1 327 aa21.77■■□□□ 1.08
HPS4-213ENST00000483631 CLUHO75153 1309 aa21.77■■□□□ 1.07
HPS4-213ENST00000483631 SMIM28A0A1B0GU29 152 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 ABLIM1O14639 778 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 TRAPPC3O43617 180 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 PLA2G4BP0C869 781 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 CUL4AQ13619 759 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 PSMD5Q16401 504 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 UPP1Q16831 310 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 ZPBP2Q6X784 338 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 RTL10Q7L3V2 364 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 SMG7Q92540 1137 aaKnown RBP21.76■■□□□ 1.07
HPS4-213ENST00000483631 ZNF707Q96C28 371 aaPredicted RBP21.76■■□□□ 1.07
HPS4-213ENST00000483631 CLSTN3Q9BQT9 956 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 TARS2Q9BW92 718 aaKnown RBP21.76■■□□□ 1.07
HPS4-213ENST00000483631 LARSQ9P2J5 1176 aaKnown RBP21.76■■□□□ 1.07
HPS4-213ENST00000483631 FBXW11Q9UKB1 542 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 ODF2LQ9ULJ1 636 aa21.76■■□□□ 1.07
HPS4-213ENST00000483631 PDCD11Q14690 1871 aaKnown RBP21.75■■□□□ 1.07
HPS4-213ENST00000483631 SLC16A4O15374 487 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 TOM1L1O75674 476 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 RFPL2O75678 378 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 ZMYND10O75800 440 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 B3GAT3O94766 335 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 KCNE1P15382 129 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 PDCP20941 246 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 FGFR3P22607 806 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 HOXA9P31269 272 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 NHLH1Q02575 133 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 STRN3Q13033 797 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 ZRSR1Q15695 479 aaKnown RBP21.75■■□□□ 1.07
HPS4-213ENST00000483631 PRSS55Q6UWB4 352 aaPredicted RBP21.75■■□□□ 1.07
HPS4-213ENST00000483631 CEP120Q8N960 986 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 TMEM161BQ8NDZ6 487 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 FEZF2Q8TBJ5 459 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 HASPINQ8TF76 798 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 NXPE3Q969Y0 559 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 CALML4Q96GE6 196 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 ACAP3Q96P50 834 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 EPS15L1Q9UBC2 864 aa21.75■■□□□ 1.07
HPS4-213ENST00000483631 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.75■■□□□ 1.07
HPS4-213ENST00000483631 ASGR2P07307 311 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 POU2F2P09086 479 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 HNRNPA1P09651 372 aaKnown RBP eCLIP21.74■■□□□ 1.07
HPS4-213ENST00000483631 MAPTP10636 758 aaKnown RBP21.74■■□□□ 1.07
HPS4-213ENST00000483631 RPL17P18621 184 aaKnown RBP21.74■■□□□ 1.07
HPS4-213ENST00000483631 AVPR2P30518 371 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms