RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ACAP3Q96P50 834 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 KLHL5Q96PQ7 755 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 S1PR5Q9H228 398 aa15.2■□□□□ 0.02
VARS-225ENST00000482996 CLDN3O15551 220 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 TRAK2O60296 914 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 YEATS4O95619 227 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 EFEMP2O95967 443 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 ADH1AP07327 375 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 EPCAMP16422 314 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 STAT6P42226 847 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 LIG4P49917 911 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 CREMQ03060 361 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 ITIH3Q06033 890 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 ELAVL2Q12926 359 aaKnown RBP15.19■□□□□ 0.02
VARS-225ENST00000482996 CBX2Q14781 532 aaPredicted RBP15.19■□□□□ 0.02
VARS-225ENST00000482996 GLRA4Q5JXX5 417 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 KIAA0319Q5VV43 1072 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 ELMSAN1Q6PJG2 1045 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 SLC22A17Q8WUG5 538 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 RABGGTAQ92696 567 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 ZBTB45Q96K62 511 aaPredicted RBP15.19■□□□□ 0.02
VARS-225ENST00000482996 UROC1Q96N76 676 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
VARS-225ENST00000482996 PHF7Q9BWX1 381 aaPredicted RBP15.19■□□□□ 0.02
VARS-225ENST00000482996 C1QTNF1Q9BXJ1 281 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 GPR62Q9BZJ7 368 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.19■□□□□ 0.02
VARS-225ENST00000482996 CHST7Q9NS84 486 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 TFIP11Q9UBB9 837 aaKnown RBP15.19■□□□□ 0.02
VARS-225ENST00000482996 CACNG4Q9UBN1 327 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 TBX20Q9UMR3 447 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 C5orf42Q9H799 3197 aa15.19■□□□□ 0.02
VARS-225ENST00000482996 SMIM28A0A1B0GU29 152 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 ABLIM1O14639 778 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 HNRNPDLO14979 420 aaKnown RBP15.18■□□□□ 0.02
VARS-225ENST00000482996 PPP6R2O75170 966 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 KIF4AO95239 1232 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 F13A1P00488 732 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 MTHFRP42898 656 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 MCL1Q07820 350 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 NAB2Q15742 525 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 XKR4Q5GH76 650 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 RARS2Q5T160 578 aaKnown RBP15.18■□□□□ 0.02
VARS-225ENST00000482996 HASPINQ8TF76 798 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 RIN2Q8WYP3 895 aaPredicted RBP15.18■□□□□ 0.02
VARS-225ENST00000482996 SNX27Q96L92 541 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 FBXL18Q96ME1 805 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 RIPOR3Q96MK2 946 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 NECTIN4Q96NY8 510 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 PAAF1Q9BRP4 392 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 CXCL16Q9H2A7 254 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 ADAM7Q9H2U9 754 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 RXFP1Q9HBX9 757 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 DPP7Q9UHL4 492 aa15.18■□□□□ 0.02
VARS-225ENST00000482996 TEX28O15482 410 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 GLUD1P00367 558 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 ALADP13716 330 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 KCNE1P15382 129 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 CLCN4P51793 760 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 KYAT1Q16773 422 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 ATL3Q6DD88 541 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 DCLRE1AQ6PJP8 1040 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 ALKAL1Q6UXT8 129 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 DYMQ7RTS9 669 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 DDX12PQ92771 950 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 DDX27Q96GQ7 796 aaKnown RBP15.17■□□□□ 0.02
VARS-225ENST00000482996 TTPALQ9BTX7 342 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 PANK2Q9BZ23 570 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 EPHX3Q9H6B9 360 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 SFXN1Q9H9B4 322 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 FNIP2Q9P278 1114 aa15.17■□□□□ 0.02
VARS-225ENST00000482996 MYMKA6NI61 221 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 PI4K2BG5E9Z4 385 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 TMEM189-UBE2V1I3L0A0 370 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 TRAPPC3O43617 180 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 CUTAO60888 179 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 B3GAT3O94766 335 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 PIGRP01833 764 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 CLTAP09496 248 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 GAP43P17677 238 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 NMT1P30419 496 aaKnown RBP15.16■□□□□ 0.02
VARS-225ENST00000482996 GTF2BQ00403 316 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 FOXD4L6Q3SYB3 417 aaPredicted RBP15.16■□□□□ 0.02
VARS-225ENST00000482996 ATAT1Q5SQI0 421 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 PDXDC1Q6P996 788 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 FOXD4L3Q6VB84 417 aaPredicted RBP15.16■□□□□ 0.02
VARS-225ENST00000482996 PDILTQ8N807 584 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 C12orf76Q8N812 135 aaPredicted RBP15.16■□□□□ 0.02
VARS-225ENST00000482996 KCNG4Q8TDN1 519 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 KHSRPQ92945 711 aaKnown RBP eCLIP15.16■□□□□ 0.02
VARS-225ENST00000482996 RPGRIP1Q96KN7 1286 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 CNTN3Q9P232 1028 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 SEL1LQ9UBV2 794 aa15.16■□□□□ 0.02
VARS-225ENST00000482996 LOC730098B7Z3J9 87 aa15.15■□□□□ 0.02
VARS-225ENST00000482996 DCXO43602 365 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms