RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 TRIP11Q15643 1979 aa18.13■□□□□ 0.49
VAMP4-204ENST00000482519 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 HNRNPDLO14979 420 aaKnown RBP18.12■□□□□ 0.49
VAMP4-204ENST00000482519 CLDN3O15551 220 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 KIF4AO95239 1232 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 CNPP09543 421 aaKnown RBP18.12■□□□□ 0.49
VAMP4-204ENST00000482519 NMT1P30419 496 aaKnown RBP18.12■□□□□ 0.49
VAMP4-204ENST00000482519 LIG4P49917 911 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 ZP2Q05996 745 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 FUT10Q6P4F1 479 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 ZPBP2Q6X784 338 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 ADHFE1Q8IWW8 467 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 KLHL5Q96PQ7 755 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 PRKAG3Q9UGI9 489 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 SSX2IPQ9Y2D8 614 aa18.12■□□□□ 0.49
VAMP4-204ENST00000482519 MORC2Q9Y6X9 1032 aaPredicted RBP18.12■□□□□ 0.49
VAMP4-204ENST00000482519 A0A087X0B3 334 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 MYMKA6NI61 221 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 ABLIM1O14639 778 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 PPP6R2O75170 966 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 YEATS4O95619 227 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 NAB2Q15742 525 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 USP41Q3LFD5 358 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 TPRNQ4KMQ1 711 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 ZC2HC1CQ53FD0 456 aaPredicted RBP18.11■□□□□ 0.49
VAMP4-204ENST00000482519 SYCE2Q6PIF2 218 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 PPFIBP1Q86W92 1011 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 CEP57Q86XR8 500 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 C12orf76Q8N812 135 aaPredicted RBP18.11■□□□□ 0.49
VAMP4-204ENST00000482519 RIN2Q8WYP3 895 aaPredicted RBP18.11■□□□□ 0.49
VAMP4-204ENST00000482519 DDX12PQ92771 950 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 PPP1R10Q96QC0 940 aaKnown RBP18.11■□□□□ 0.49
VAMP4-204ENST00000482519 TBC1D7Q9P0N9 293 aa18.11■□□□□ 0.49
VAMP4-204ENST00000482519 SF3B1O75533 1304 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■■■ 133.7
VAMP4-204ENST00000482519 CUTAO60888 179 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 LILRB3O75022 631 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 BRD1O95696 1058 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 MYBP10242 640 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 IDEP14735 1019 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 HOXB8P17481 243 aaPredicted RBP18.1■□□□□ 0.49
VAMP4-204ENST00000482519 ME1P48163 572 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 CLCNKBP51801 687 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 DSG1Q02413 1049 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 DNM1Q05193 864 aaKnown RBP18.1■□□□□ 0.49
VAMP4-204ENST00000482519 RARS2Q5T160 578 aaKnown RBP18.1■□□□□ 0.49
VAMP4-204ENST00000482519 FAM171A1Q5VUB5 890 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 KIAA0319Q5VV43 1072 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 CES5AQ6NT32 575 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 KANK3Q6NY19 840 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 SFR1Q86XK3 245 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 GLYCTKQ8IVS8 523 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 SLC22A17Q8WUG5 538 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 POP1Q99575 1024 aaKnown RBP18.1■□□□□ 0.49
VAMP4-204ENST00000482519 S1PR5Q9H228 398 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 GOLGA2P5Q9HBQ8 144 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 CDH22Q9UJ99 828 aa18.1■□□□□ 0.49
VAMP4-204ENST00000482519 TEX28O15482 410 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 B3GAT3O94766 335 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 EFEMP2O95967 443 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 ADH1AP07327 375 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 WEE2P0C1S8 567 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 SCP2P22307 547 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 MCL1Q07820 350 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 ALKAL1Q6UXT8 129 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 RNF168Q8IYW5 571 aaPredicted RBP18.09■□□□□ 0.49
VAMP4-204ENST00000482519 KCNG4Q8TDN1 519 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 STAMQ92783 540 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 KHSRPQ92945 711 aaKnown RBP eCLIP18.09■□□□□ 0.49
VAMP4-204ENST00000482519 RPGRIP1Q96KN7 1286 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 SNX27Q96L92 541 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 FBXL18Q96ME1 805 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 ZMAT2Q96NC0 199 aaKnown RBP18.09■□□□□ 0.49
VAMP4-204ENST00000482519 HAPLN2Q9GZV7 340 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 MRPL44Q9H9J2 332 aaKnown RBP18.09■□□□□ 0.49
VAMP4-204ENST00000482519 CHST7Q9NS84 486 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 SLC38A7Q9NVC3 462 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 DZANK1Q9NVP4 752 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 CFAP45Q9UL16 551 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 CITO14578 2027 aa18.09■□□□□ 0.49
VAMP4-204ENST00000482519 SPATA31D3P0C874 917 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 RPL17P18621 184 aaKnown RBP18.08■□□□□ 0.48
VAMP4-204ENST00000482519 IGFBP6P24592 240 aaPredicted RBP18.08■□□□□ 0.48
VAMP4-204ENST00000482519 CLCN4P51793 760 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 SOX4Q06945 474 aaPredicted RBP18.08■□□□□ 0.48
VAMP4-204ENST00000482519 SPAG1Q07617 926 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 CBX2Q14781 532 aaPredicted RBP18.08■□□□□ 0.48
VAMP4-204ENST00000482519 SHC4Q6S5L8 630 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 PRSS55Q6UWB4 352 aaPredicted RBP18.08■□□□□ 0.48
VAMP4-204ENST00000482519 SPATA31D4Q6ZUB0 917 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 PALB2Q86YC2 1186 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 C18orf25Q96B23 403 aaPredicted RBP18.08■□□□□ 0.48
VAMP4-204ENST00000482519 DHX58Q96C10 678 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 UROC1Q96N76 676 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 FIZ1Q96SL8 496 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 MSTO1Q9BUK6 570 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 EPHX3Q9H6B9 360 aa18.08■□□□□ 0.48
VAMP4-204ENST00000482519 C19orf67A6NJJ6 358 aa18.07■□□□□ 0.48
VAMP4-204ENST00000482519 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
VAMP4-204ENST00000482519 MEFVO15553 781 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms