RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	RUBCN	Q92622	972 aa		27.91	■■■□□ 2.06
STK40-208	ENST00000482458	PDZD7	Q9H5P4	517 aa		27.91	■■■□□ 2.06
STK40-208	ENST00000482458	KANSL1L	A0AUZ9	987 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	WNT7A	O00755	349 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	N4BP3	O15049	544 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	RECQL4	O94761	1208 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	FDPS	P14324	419 aa	Known RBP	27.9	■■■□□ 2.06
STK40-208	ENST00000482458	ELAVL2	Q12926	359 aa	Known RBP	27.9	■■■□□ 2.06
STK40-208	ENST00000482458	MLF2	Q15773	248 aa	Predicted RBP	27.9	■■■□□ 2.06
STK40-208	ENST00000482458	PDXDC1	Q6P996	788 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	DGLUCY	Q7Z3D6	616 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	MAML2	Q8IZL2	1156 aa	Predicted RBP	27.9	■■■□□ 2.06
STK40-208	ENST00000482458	SLC7A14	Q8TBB6	771 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	MTMR9	Q96QG7	549 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	CXCL16	Q9H2A7	254 aa		27.9	■■■□□ 2.06
STK40-208	ENST00000482458	DOCK6	Q96HP0	2047 aa		27.89	■■■□□ 2.06
STK40-208	ENST00000482458	OTOGL	Q3ZCN5	2332 aa		27.89	■■■□□ 2.06
STK40-208	ENST00000482458	DCLK2	Q8N568	766 aa		27.89	■■■□□ 2.06
STK40-208	ENST00000482458	BCO2	Q9BYV7	579 aa		27.89	■■■□□ 2.06
STK40-208	ENST00000482458	SPATA31C1	P0DKV0	1188 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	ATP2B1	P20020	1258 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	PRKCQ	Q04759	706 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	PRPF4B	Q13523	1007 aa	Known RBP	27.88	■■■□□ 2.05
STK40-208	ENST00000482458	NAB2	Q15742	525 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	SLC44A4	Q53GD3	710 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.88	■■■□□ 2.05
STK40-208	ENST00000482458	NOSTRIN	Q8IVI9	506 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	DDX23	Q9BUQ8	820 aa	Known RBP	27.88	■■■□□ 2.05
STK40-208	ENST00000482458	C2orf40	Q9H1Z8	148 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	SPATA6	Q9NWH7	488 aa	Predicted RBP	27.88	■■■□□ 2.05
STK40-208	ENST00000482458	USP20	Q9Y2K6	914 aa		27.88	■■■□□ 2.05
STK40-208	ENST00000482458	MYH15	Q9Y2K3	1946 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	MED19	A0JLT2	244 aa	Predicted RBP	27.87	■■■□□ 2.05
STK40-208	ENST00000482458	BTBD18	B2RXH4	712 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	KIN	O60870	393 aa	Known RBP	27.87	■■■□□ 2.05
STK40-208	ENST00000482458	OR1D2	P34982	312 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	RAB33A	Q14088	237 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	UBXN2B	Q14CS0	331 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	MAPK6	Q16659	721 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.87	■■■□□ 2.05
STK40-208	ENST00000482458	NECAB1	Q8N987	351 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	BSND	Q8WZ55	320 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	KXD1	Q9BQD3	176 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	ADPGK	Q9BRR6	497 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	HCFC1R1	Q9NWW0	138 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	MTF2	Q9Y483	593 aa	Predicted RBP	27.87	■■■□□ 2.05
STK40-208	ENST00000482458	CACNA1I	Q9P0X4	2223 aa		27.87	■■■□□ 2.05
STK40-208	ENST00000482458	PRKCB	P05771	671 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	POU2F2	P09086	479 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	LIG1	P18858	919 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	PFKP	Q01813	784 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	PUM1	Q14671	1186 aa	Known RBP eCLIP	27.86	■■■□□ 2.05
STK40-208	ENST00000482458	CATSPER3	Q86XQ3	398 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	DIS3L2	Q8IYB7	885 aa	Known RBP	27.86	■■■□□ 2.05
STK40-208	ENST00000482458	SUMF1	Q8NBK3	374 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	TMEM60	Q9H2L4	133 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	TUFT1	Q9NNX1	390 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	COL4A3	Q01955	1670 aa		27.86	■■■□□ 2.05
STK40-208	ENST00000482458	FAM170B	A6NMN3	283 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	LAMTOR5	O43504	91 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	FGFR3	P22607	806 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	FOSB	P53539	338 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	ANKRD1	Q15327	319 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	UVSSA	Q2YD98	709 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	PABPC1L	Q4VXU2	614 aa	Known RBP	27.85	■■■□□ 2.05
STK40-208	ENST00000482458	EEF1DP3	Q658K8	133 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	NPAS3	Q8IXF0	933 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	DNMT3B	Q9UBC3	853 aa	Known RBP	27.85	■■■□□ 2.05
STK40-208	ENST00000482458	MTRR	Q9UBK8	725 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	FBXO4	Q9UKT5	387 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	KCNH3	Q9ULD8	1083 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	GDA	Q9Y2T3	454 aa		27.85	■■■□□ 2.05
STK40-208	ENST00000482458	FANCM	Q8IYD8	2048 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	ACKR2	O00590	384 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	MED24	O75448	989 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	ZNF528	Q3MIS6	628 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	DEPTOR	Q8TB45	409 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	ING5	Q8WYH8	240 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	NACC1	Q96RE7	527 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	OSBPL6	Q9BZF3	934 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	CCDC113	Q9H0I3	377 aa		27.84	■■■□□ 2.05
STK40-208	ENST00000482458	B3GAT3	O94766	335 aa		27.83	■■■□□ 2.05
STK40-208	ENST00000482458	EDN1	P05305	212 aa		27.83	■■■□□ 2.05
STK40-208	ENST00000482458	CD72	P21854	359 aa		27.83	■■■□□ 2.05
STK40-208	ENST00000482458	IGFBP6	P24592	240 aa	Predicted RBP	27.83	■■■□□ 2.05
STK40-208	ENST00000482458	RSPO2	Q6UXX9	243 aa	Predicted RBP	27.83	■■■□□ 2.05
STK40-208	ENST00000482458	LTB4R2	Q9NPC1	389 aa		27.83	■■■□□ 2.05
STK40-208	ENST00000482458	CDY1	Q9Y6F8	540 aa		27.83	■■■□□ 2.05
STK40-208	ENST00000482458	GPR179	Q6PRD1	2367 aa		27.83	■■■□□ 2.05
STK40-208	ENST00000482458	CEP250	Q9BV73	2442 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	TMEM189-UBE2V1	I3L0A0	370 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	NAMPT	P43490	491 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	CSTF1	Q05048	431 aa	Known RBP	27.82	■■■□□ 2.04
STK40-208	ENST00000482458	DCAF4L1	Q3SXM0	396 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	GLRA4	Q5JXX5	417 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	PADI6	Q6TGC4	694 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	GTF3C6	Q969F1	213 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	MRPS23	Q9Y3D9	190 aa	Known RBP	27.82	■■■□□ 2.04
STK40-208	ENST00000482458	MIA3	Q5JRA6	1907 aa		27.82	■■■□□ 2.04
STK40-208	ENST00000482458	VWA8	A3KMH1	1905 aa		27.81	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms