RNA–Protein interactions for RNA: ENST00000482019.1

LINC02004-201, Transcript of long intergenic non-protein coding RNA 2004, humanhuman

TSL 2 BASIC

Gene LINC02004, Length 294 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02004-201ENST00000482019 SF3B1O75533 1304 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC02004-201ENST00000482019 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 F8W810 466 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 HNRNPDLO14979 420 aaKnown RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 KIF4AO95239 1232 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 PIGRP01833 764 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 ADH1AP07327 375 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 CNPP09543 421 aaKnown RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 HARSP12081 509 aaKnown RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 KCNE1P15382 129 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 GAP43P17677 238 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 MATR3P43243 847 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 LIG4P49917 911 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 OSTNP61366 133 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 GTF2BQ00403 316 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 CREMQ03060 361 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 ELAVL2Q12926 359 aaKnown RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 PKP1Q13835 747 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 KYAT1Q16773 422 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 USP41Q3LFD5 358 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 KIAA0319Q5VV43 1072 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 SYCE2Q6PIF2 218 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 ALKAL1Q6UXT8 129 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 DYMQ7RTS9 669 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 MAP4K3Q8IVH8 894 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 SLC22A17Q8WUG5 538 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 SUSD6Q92537 303 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 DDX12PQ92771 950 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 KLHL5Q96PQ7 755 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 PAAF1Q9BRP4 392 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 S1PR5Q9H228 398 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 CXCL16Q9H2A7 254 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 CUEDC2Q9H467 287 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 RXFP1Q9HBX9 757 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 SLC38A7Q9NVC3 462 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
LINC02004-201ENST00000482019 TCF20Q9UGU0 1960 aaKnown RBP11.27□□□□□ -0.61
LINC02004-201ENST00000482019 A0A087X0B3 334 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 SMIM28A0A1B0GU29 152 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 MYMKA6NI61 221 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 C2CD2LO14523 706 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 C1RP00736 705 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 EPCAMP16422 314 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 KLRC2P26717 231 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 CLCN4P51793 760 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 ITIH3Q06033 890 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
LINC02004-201ENST00000482019 CES5AQ6NT32 575 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 ELMSAN1Q6PJG2 1045 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
LINC02004-201ENST00000482019 TAS1R1Q7RTX1 841 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 SFR1Q86XK3 245 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 RABGGTAQ92696 567 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 DDX27Q96GQ7 796 aaKnown RBP11.26□□□□□ -0.61
LINC02004-201ENST00000482019 GPR62Q9BZJ7 368 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 ADAM7Q9H2U9 754 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 PLEKHA5Q9HAU0 1116 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 CD320Q9NPF0 282 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 FNIP2Q9P278 1114 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 CACNG4Q9UBN1 327 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 DPP7Q9UHL4 492 aa11.26□□□□□ -0.61
LINC02004-201ENST00000482019 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
LINC02004-201ENST00000482019 FRMD3A2A2Y4 597 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 OGTO15294 1046 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 TEX28O15482 410 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 B3GAT3O94766 335 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 CLTAP09496 248 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
LINC02004-201ENST00000482019 ME1P48163 572 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 CLCNKBP51801 687 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
LINC02004-201ENST00000482019 ALCAMQ13740 583 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 CBX2Q14781 532 aaPredicted RBP11.25□□□□□ -0.61
LINC02004-201ENST00000482019 UPP1Q16831 310 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 AXDND1Q5T1B0 1012 aaPredicted RBP11.25□□□□□ -0.61
LINC02004-201ENST00000482019 PDXDC1Q6P996 788 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 DCLRE1AQ6PJP8 1040 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 SHC4Q6S5L8 630 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 ZNF720Q7Z2F6 126 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 PDILTQ8N807 584 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 IQUBQ8NA54 791 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 HASPINQ8TF76 798 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 RIN2Q8WYP3 895 aaPredicted RBP11.25□□□□□ -0.61
LINC02004-201ENST00000482019 DNAJC19Q96DA6 116 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 FBXL18Q96ME1 805 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 NECTIN4Q96NY8 510 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 TTPALQ9BTX7 342 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 PHF7Q9BWX1 381 aaPredicted RBP11.25□□□□□ -0.61
LINC02004-201ENST00000482019 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 HAPLN2Q9GZV7 340 aa11.25□□□□□ -0.61
LINC02004-201ENST00000482019 SFXN1Q9H9B4 322 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms