RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 POLR3FQ9H1D9 316 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-217ENST00000481875 C2orf40Q9H1Z8 148 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-217ENST00000481875 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-217ENST00000481875 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 NOL7Q9UMY1 257 aaKnown RBP12.76□□□□□ -0.37
GARNL3-217ENST00000481875 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
GARNL3-217ENST00000481875 DMXL1Q9Y485 3027 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 PRR23AA6NEV1 266 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 F8W810 466 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 WNT7AO00755 349 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 SF3B1O75533 1304 aaKnown RBP eCLIP12.75□□□□□ -0.37
GARNL3-217ENST00000481875 ZMYND10O75800 440 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 HNRNPA1P09651 372 aaKnown RBP eCLIP12.75□□□□□ -0.37
GARNL3-217ENST00000481875 SRFP11831 508 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 LAMP2P13473 410 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 HOXA9P31269 272 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 FOXK2Q01167 660 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 ELAVL2Q12926 359 aaKnown RBP12.75□□□□□ -0.37
GARNL3-217ENST00000481875 RESTQ13127 1097 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 PKP1Q13835 747 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
GARNL3-217ENST00000481875 NAB2Q15742 525 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 PHLDB3Q6NSJ2 640 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 PIK3R5Q8WYR1 880 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
GARNL3-217ENST00000481875 CCDC43Q96MW1 224 aaKnown RBP12.75□□□□□ -0.37
GARNL3-217ENST00000481875 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 SEMA4AQ9H3S1 761 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 SLC2A4RGQ9NR83 387 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 CHMP5Q9NZZ3 219 aa12.75□□□□□ -0.37
GARNL3-217ENST00000481875 POTEMA6NI47 508 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 ACKR2O00590 384 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 N4BP3O15049 544 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 PI15O43692 258 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 RFPL2O75678 378 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 NPTXRO95502 500 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 F13A1P00488 732 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 CYP11B2P19099 503 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 AKAP5P24588 427 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 DDIT3P35638 169 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 ASCL5Q7RTU5 278 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 MYADMQ96S97 322 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 TTPALQ9BTX7 342 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 TMEM60Q9H2L4 133 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 WDR70Q9NW82 654 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 FBXW11Q9UKB1 542 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 MYH15Q9Y2K3 1946 aa12.74□□□□□ -0.37
GARNL3-217ENST00000481875 PTGESO14684 152 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 MED24O75448 989 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 TADA2AO75478 443 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 THP07101 528 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 GBP2P32456 591 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-217ENST00000481875 NAMPTP43490 491 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 EFNA5P52803 228 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 ZNF174Q15697 407 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 MAPK6Q16659 721 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-217ENST00000481875 RILPL1Q5EBL4 403 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 RTP2Q5QGT7 225 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-217ENST00000481875 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 ZBTB8OSQ8IWT0 167 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 SIX5Q8N196 739 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 DTWD2Q8NBA8 298 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 LNX1Q8TBB1 728 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-217ENST00000481875 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-217ENST00000481875 NKD2Q969F2 451 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-217ENST00000481875 CLSTN3Q9BQT9 956 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 PDZD7Q9H5P4 517 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 FBXL21Q9UKT6 434 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 F5P12259 2224 aa12.73□□□□□ -0.37
GARNL3-217ENST00000481875 CITO14578 2027 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 KRBA1A5PL33 1030 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 LRRIQ4A6NIV6 560 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
GARNL3-217ENST00000481875 USO1O60763 962 aaKnown RBP12.72□□□□□ -0.37
GARNL3-217ENST00000481875 PRPF4BQ13523 1007 aaKnown RBP12.72□□□□□ -0.37
GARNL3-217ENST00000481875 HTR4Q13639 388 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 PDIA5Q14554 519 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 PADI6Q6TGC4 694 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 FLCNQ8NFG4 579 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 B3GALT6Q96L58 329 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 SNX27Q96L92 541 aa12.72□□□□□ -0.37
GARNL3-217ENST00000481875 ZNF396Q96N95 335 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-217ENST00000481875 PAAF1Q9BRP4 392 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms