RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PIGRP01833 764 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 ITGB1P05556 798 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 GAP43P17677 238 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 HOXD13P35453 343 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 SCNN1GP51170 649 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 EMP3P54852 163 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 OSTNP61366 133 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 NCBP1Q09161 790 aaKnown RBP11.59□□□□□ -0.55
SSBP1-210ENST00000481508 STRN3Q13033 797 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 GPM6BQ13491 265 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
SSBP1-210ENST00000481508 CAMK1Q14012 370 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 DCAF4L1Q3SXM0 396 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 MPZL3Q6UWV2 235 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 KRBA2Q6ZNG9 492 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 MAP4K3Q8IVH8 894 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 CCDC65Q8IXS2 484 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 CEP57L1Q8IYX8 460 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 KLHL23Q8NBE8 558 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 ZSWIM2Q8NEG5 633 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 PGBD4Q96DM1 585 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 GBP3Q9H0R5 595 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 ST6GALNAC4Q9H4F1 302 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 MRPL44Q9H9J2 332 aaKnown RBP11.59□□□□□ -0.55
SSBP1-210ENST00000481508 MAGEF1Q9HAY2 307 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 ALG13Q9NP73 1137 aaKnown RBP11.59□□□□□ -0.55
SSBP1-210ENST00000481508 OLFML3Q9NRN5 406 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 PCDHGC5Q9Y5F6 944 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 MTCH2Q9Y6C9 303 aa11.59□□□□□ -0.55
SSBP1-210ENST00000481508 DMDP11532 3685 aa11.58□□□□□ -0.55
SSBP1-210ENST00000481508 PTPRZ1P23471 2315 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 F8W810 466 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 H3BNC9 293 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 FAM189A1O60320 539 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 GCNT3O95395 438 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 IGFBP6P24592 240 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 TNFSF9P41273 254 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 GRM5P41594 1212 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 SLC11A1P49279 550 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 BCAR1P56945 870 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 MCL1Q07820 350 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 NOLC1Q14978 699 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 SPOUT1Q5T280 376 aaKnown RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 ZPBP2Q6X784 338 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 UNC13DQ70J99 1090 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 EPM2AIP1Q7L775 607 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 THNSL1Q8IYQ7 743 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 CNNM3Q8NE01 707 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 ERCC4Q92889 916 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 BICD1Q96G01 975 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 SAMD11Q96NU1 681 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 SEL1LQ9UBV2 794 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 GIT1Q9Y2X7 761 aa11.58□□□□□ -0.56
SSBP1-210ENST00000481508 RIF1Q5UIP0 2472 aaKnown RBP11.58□□□□□ -0.56
SSBP1-210ENST00000481508 ZC3H11AO75152 810 aaKnown RBP eCLIP11.57□□□□□ -0.56
SSBP1-210ENST00000481508 NR1I2O75469 434 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 TOM1L1O75674 476 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 MCF2P10911 925 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 LAG3P18627 525 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 ADSSP30520 456 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 IRS1P35568 1242 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 LIG4P49917 911 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 AMPD3Q01432 767 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 DSC1Q08554 894 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 DPYDQ12882 1025 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 NAB2Q15742 525 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 KMT5BQ4FZB7 885 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 FAM26FQ5R3K3 315 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 L1TD1Q5T7N2 865 aaKnown RBP11.57□□□□□ -0.56
SSBP1-210ENST00000481508 KCNT2Q6UVM3 1135 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 SLC39A11Q8N1S5 342 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 KIAA0895Q8NCT3 520 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 SPPL3Q8TCT6 385 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 ZMAT2Q96NC0 199 aaKnown RBP11.57□□□□□ -0.56
SSBP1-210ENST00000481508 PAAF1Q9BRP4 392 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 PYM1Q9BRP8 204 aaKnown RBP11.57□□□□□ -0.56
SSBP1-210ENST00000481508 ADPGKQ9BRR6 497 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 TCHPQ9BT92 498 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 VN1R3Q9BXE9 311 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 USP25Q9UHP3 1055 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 FAM186AA6NE01 2351 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 EPG5Q9HCE0 2579 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 WDR87Q6ZQQ6 2873 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 VPS13AQ96RL7 3174 aa11.57□□□□□ -0.56
SSBP1-210ENST00000481508 A0A0B4J269 797 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 H0YCG3 227 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 HNRNPDLO14979 420 aaKnown RBP11.56□□□□□ -0.56
SSBP1-210ENST00000481508 FGF18O76093 207 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 GALTP07902 379 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 CXCL8P10145 99 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 WNT7BP56706 349 aa11.56□□□□□ -0.56
SSBP1-210ENST00000481508 RNASELQ05823 741 aaKnown RBP11.56□□□□□ -0.56
SSBP1-210ENST00000481508 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms