RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 GET4Q7L5D6 327 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-214ENST00000480562 SIX5Q8N196 739 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 LNX1Q8TBB1 728 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-214ENST00000480562 CLSTN3Q9BQT9 956 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 EPS15L1Q9UBC2 864 aa20.74■□□□□ 0.91
ABCF3-214ENST00000480562 E9PMD0 336 aa20.73■□□□□ 0.91
ABCF3-214ENST00000480562 ADAM12O43184 909 aa20.73■□□□□ 0.91
ABCF3-214ENST00000480562 PI15O43692 258 aa20.73■□□□□ 0.91
ABCF3-214ENST00000480562 PDIA5Q14554 519 aa20.73■□□□□ 0.91
ABCF3-214ENST00000480562 IGSF22Q8N9C0 903 aa20.73■□□□□ 0.91
ABCF3-214ENST00000480562 ST13P5Q8NFI4 369 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-214ENST00000480562 PIK3R5Q8WYR1 880 aa20.73■□□□□ 0.91
ABCF3-214ENST00000480562 CCDC169A6NNP5 214 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 K7ERI5 159 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 GFRA3O60609 400 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 CFHP08603 1231 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 CDC25AP30304 524 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 PEX3P56589 373 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 IL17AQ16552 155 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 SLC44A3Q8N4M1 653 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 FBXW11Q9UKB1 542 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 DOCK8Q8NF50 2099 aa20.72■□□□□ 0.91
ABCF3-214ENST00000480562 LAMP2P13473 410 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 ELAVL2Q12926 359 aaKnown RBP20.71■□□□□ 0.91
ABCF3-214ENST00000480562 C8orf34Q49A92 452 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 DAW1Q8N136 415 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 CEP120Q8N960 986 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 PPP1R10Q96QC0 940 aaKnown RBP20.71■□□□□ 0.91
ABCF3-214ENST00000480562 RUSC1Q9BVN2 902 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 RAB34Q9BZG1 259 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 DNM3Q9UQ16 869 aa20.71■□□□□ 0.91
ABCF3-214ENST00000480562 DOCK6Q96HP0 2047 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 HIP1RO75146 1068 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 AOC1P19801 751 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 NPTX2P47972 431 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 CLCNKBP51801 687 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 OSTNP61366 133 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 NTHL1P78549 312 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 LIN9Q5TKA1 542 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 KRT79Q5XKE5 535 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 GRASPQ7Z6J2 395 aaPredicted RBP20.7■□□□□ 0.9
ABCF3-214ENST00000480562 GOLGA2P5Q9HBQ8 144 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.7■□□□□ 0.9
ABCF3-214ENST00000480562 TNFSF13BQ9Y275 285 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 STK24Q9Y6E0 443 aa20.7■□□□□ 0.9
ABCF3-214ENST00000480562 VWA8A3KMH1 1905 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 KRBA1A5PL33 1030 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 I3L4J1 428 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 CCL16O15467 120 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 B3GAT3O94766 335 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 C8AP07357 584 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 FSHRP23945 695 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 PPM1LQ5SGD2 360 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 DCLRE1AQ6PJP8 1040 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 CD300LGQ6UXG3 332 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.69■□□□□ 0.9
ABCF3-214ENST00000480562 TAS1R3Q7RTX0 852 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 KCNK18Q7Z418 384 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 APBB1IPQ7Z5R6 666 aaPredicted RBP20.69■□□□□ 0.9
ABCF3-214ENST00000480562 ACO2Q99798 780 aaKnown RBP20.69■□□□□ 0.9
ABCF3-214ENST00000480562 MMTAG2Q9BU76 263 aaKnown RBP20.69■□□□□ 0.9
ABCF3-214ENST00000480562 CDT1Q9H211 546 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 WNT16Q9UBV4 365 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 CA14Q9ULX7 337 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 POLIQ9UNA4 740 aa20.69■□□□□ 0.9
ABCF3-214ENST00000480562 SMIM28A0A1B0GU29 152 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 SFI1A8K8P3 1242 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 STK25O00506 426 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 ST18O60284 1047 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 SRFP11831 508 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 FGFR3P22607 806 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 OR1D2P34982 312 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 MAPK7Q13164 816 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 DMP1Q13316 513 aaPredicted RBP20.68■□□□□ 0.9
ABCF3-214ENST00000480562 HTR4Q13639 388 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 RAB33AQ14088 237 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
ABCF3-214ENST00000480562 ZNF568Q3ZCX4 644 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 MCTP1Q6DN14 999 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 RINT1Q6NUQ1 792 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 PDXDC1Q6P996 788 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 RSPO2Q6UXX9 243 aaPredicted RBP20.68■□□□□ 0.9
ABCF3-214ENST00000480562 DTHD1Q6ZMT9 781 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 C3orf58Q8NDZ4 430 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 NXPE3Q969Y0 559 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 TARS2Q9BW92 718 aaKnown RBP20.68■□□□□ 0.9
ABCF3-214ENST00000480562 PTPRHQ9HD43 1115 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 KMT5AQ9NQR1 393 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.68■□□□□ 0.9
ABCF3-214ENST00000480562 NUMBLQ9Y6R0 609 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 PHLPP2Q6ZVD8 1323 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 TRIP11Q15643 1979 aa20.68■□□□□ 0.9
ABCF3-214ENST00000480562 MYO15AQ9UKN7 3530 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 ANHXE9PGG2 379 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 TMEM189-UBE2V1I3L0A0 370 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 LAD1O00515 517 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 HNRNPA1P09651 372 aaKnown RBP eCLIP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 TKTP29401 623 aaKnown RBP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 GRM5P41594 1212 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 BRCC3P46736 316 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms