RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MGEA5O60502 916 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 PTMAP06454 111 aaKnown RBP19.04■□□□□ 0.64
UPF3A-206ENST00000480362 SLC9A1P19634 815 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 MXI1P50539 228 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 YARSP54577 528 aaKnown RBP19.04■□□□□ 0.64
UPF3A-206ENST00000480362 EXOC3L4Q17RC7 722 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 KRT39Q6A163 491 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 SV2AQ7L0J3 742 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 PPFIBP1Q86W92 1011 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 SMG8Q8ND04 991 aaKnown RBP19.04■□□□□ 0.64
UPF3A-206ENST00000480362 FAM84AQ96KN4 292 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 APOL6Q9BWW8 343 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 LSM14BQ9BX40 385 aaKnown RBP19.04■□□□□ 0.64
UPF3A-206ENST00000480362 PPP1R12CQ9BZL4 782 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 NXF3Q9H4D5 531 aaKnown RBP19.04■□□□□ 0.64
UPF3A-206ENST00000480362 TMEM39AQ9NV64 488 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 TBX21Q9UL17 535 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 IPPQ9Y573 584 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 PCDHB2Q9Y5E7 798 aa19.04■□□□□ 0.64
UPF3A-206ENST00000480362 PTPRJQ12913 1337 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 TTC26A0AVF1 554 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 NBNO60934 754 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 C4BPAP04003 597 aaKnown RBP19.03■□□□□ 0.64
UPF3A-206ENST00000480362 CLTBP09497 229 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 CCL23P55773 120 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 CETN1Q12798 172 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 GPNMBQ14956 572 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 CCDC186Q7Z3E2 898 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 WDR49Q8IV35 697 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 CD302Q8IX05 232 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 EHBP1Q8NDI1 1231 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 NEK11Q8NG66 645 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 OR5B17Q8NGF7 314 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 CPLX3Q8WVH0 158 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 ADAM2Q99965 735 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 NUP58Q9BVL2 599 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 IFIH1Q9BYX4 1025 aaKnown RBP19.03■□□□□ 0.64
UPF3A-206ENST00000480362 RNF39Q9H2S5 420 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 ASB7Q9H672 318 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 FAM105AQ9NUU6 356 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 GCNT4Q9P109 453 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 PARP2Q9UGN5 583 aa19.03■□□□□ 0.64
UPF3A-206ENST00000480362 AKAP5P24588 427 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 PON1P27169 355 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 CYP2C18P33260 490 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 AP3M2P53677 418 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 TRIM14Q14142 442 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 EPC2Q52LR7 807 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 C15orf39Q6ZRI6 1047 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 SCLYQ96I15 445 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 TRAIPQ9BWF2 469 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 WNT8AQ9H1J5 351 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 PLEKHA5Q9HAU0 1116 aa19.02■□□□□ 0.64
UPF3A-206ENST00000480362 FAM207AQ9NSI2 230 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-206ENST00000480362 RECQL4O94761 1208 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 GYPCP04921 128 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 ACTN1P12814 892 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 TRIM21P19474 475 aaKnown RBP19.01■□□□□ 0.63
UPF3A-206ENST00000480362 TFAMQ00059 246 aaKnown RBP19.01■□□□□ 0.63
UPF3A-206ENST00000480362 APBA1Q02410 837 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 BIRC3Q13489 604 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 DUOXA2Q1HG44 320 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 ZACNQ401N2 412 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 TDRD10Q5VZ19 366 aaKnown RBP19.01■□□□□ 0.63
UPF3A-206ENST00000480362 JADE1Q6IE81 842 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 DPY19L2P1Q6NXN4 242 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 UBE2Q1Q7Z7E8 422 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 MRPL10Q7Z7H8 261 aaKnown RBP19.01■□□□□ 0.63
UPF3A-206ENST00000480362 RTN4RL1Q86UN2 441 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-206ENST00000480362 EFCAB13Q8IY85 973 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 FBXL13Q8NEE6 735 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 LMO3Q8TAP4 145 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 TAS1R2Q8TE23 839 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 SNX27Q96L92 541 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 INTS2Q9H0H0 1204 aaKnown RBP19.01■□□□□ 0.63
UPF3A-206ENST00000480362 PLCB1Q9NQ66 1216 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 COQ4Q9Y3A0 265 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 ANK1P16157 1881 aa19.01■□□□□ 0.63
UPF3A-206ENST00000480362 RNF225M0QZC1 329 aaPredicted RBP19■□□□□ 0.63
UPF3A-206ENST00000480362 EPHB6O15197 1021 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 PHACTR2O75167 634 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 NOL4O94818 638 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
UPF3A-206ENST00000480362 NFICP08651 508 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 TPM1P09493 284 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 TMEM191BP0C7N4 346 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 ITGA4P13612 1032 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 CASP14P31944 242 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 RAB27AP51159 221 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 GOLGA8FQ08AF8 430 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 GOLGA8DPQ0D2H9 430 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 PLEKHG4Q58EX7 1191 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 FIGNQ5HY92 759 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 TRIM65Q6PJ69 517 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 ALKAL1Q6UXT8 129 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 HACE1Q8IYU2 909 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 DBF4BQ8NFT6 615 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 CACTINQ8WUQ7 758 aaKnown RBP19■□□□□ 0.63
UPF3A-206ENST00000480362 SEMA4DQ92854 862 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 IQCDQ96DY2 449 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms