RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 EIF4EBP3O60516 100 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-213ENST00000480102 GAS7O60861 476 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 BAG4O95429 457 aaKnown RBP5.49□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF286BP0CG31 522 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 INSRRP14616 1297 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 TMOD1P28289 359 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 EPHB4P54760 987 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 PSMC5P62195 406 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 PSMC6P62333 389 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 MGAT3Q09327 533 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 PDIA5Q14554 519 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 EPHA7Q15375 998 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 SHHQ15465 462 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 PRR16Q569H4 304 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 RILPL1Q5EBL4 403 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 LRCH2Q5VUJ6 765 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 ARL6IP4Q66PJ3 421 aaKnown RBP5.49□□□□□ -1.53
PTCD3-213ENST00000480102 RAB11FIP4Q86YS3 637 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 CCDC60Q8IWA6 550 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-213ENST00000480102 PIBF1Q8WXW3 757 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 HAS1Q92839 578 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 C8orf76Q96K31 380 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 SAMD11Q96NU1 681 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 CEP89Q96ST8 783 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 NRSN2Q9GZP1 204 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF576Q9H609 170 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 PRDM5Q9NQX1 630 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF302Q9NR11 478 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 TMEM260Q9NX78 707 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 LMCD1Q9NZU5 365 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 STXBP5LQ9Y2K9 1186 aa5.49□□□□□ -1.53
PTCD3-213ENST00000480102 LAMA2P24043 3122 aaKnown RBP5.49□□□□□ -1.53
PTCD3-213ENST00000480102 ZMYM2Q9UBW7 1377 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 BTBD18B2RXH4 712 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 KIF28PB7ZC32 967 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ASAP2O43150 1006 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 NBNO60934 754 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 GADD45BO75293 160 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 MAFO75444 373 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 GJB5O95377 273 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 LARGE1O95461 756 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 C22orf31O95567 290 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 B3GALT4O96024 378 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 CYP2C9P11712 490 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 SYN1P17600 705 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 QARSP47897 775 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 PREPP48147 710 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 CRYBB1P53674 252 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 HTRA4P83105 476 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 GSTM4Q03013 218 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 STK3Q13188 491 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 DSC3Q14574 896 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 COL19A1Q14993 1142 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF423Q2M1K9 1284 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 LETM2Q2VYF4 491 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 FAM47CQ5HY64 1035 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 FBXO47Q5MNV8 452 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF618Q5T7W0 954 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 FDX2Q6P4F2 183 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 MTHFD1LQ6UB35 978 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 TSHZ1Q6ZSZ6 1077 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 PIK3AP1Q6ZUJ8 805 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF365Q70YC5 407 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 OTUD6AQ7L8S5 288 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 BRAPQ7Z569 592 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF410Q86VK4 478 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 KIAA0319LQ8IZA0 1049 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 Q8N3U1 123 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 NECAB1Q8N987 351 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 IGSF22Q8N9C0 903 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 FAM184AQ8NB25 1140 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 GLIS3Q8NEA6 775 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 RASGRP4Q8TDF6 673 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 SEPT8Q92599 483 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 UTP4Q969X6 686 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 RNPC3Q96LT9 517 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 MYRFLQ96LU7 910 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 POLR3CQ9BUI4 534 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 TMPRSS13Q9BYE2 586 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 RAB34Q9BZG1 259 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 INO80BQ9C086 356 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 DHX33Q9H6R0 707 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 BCAS3Q9H6U6 928 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ELAC1Q9H777 363 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ZSWIM4Q9H7M6 989 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 TUFT1Q9NNX1 390 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 CHST12Q9NRB3 414 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 ANKEF1Q9NU02 776 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 SETD4Q9NVD3 440 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 MTMR10Q9NXD2 777 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 KCNG1Q9UIX4 513 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 NOL7Q9UMY1 257 aaKnown RBP5.48□□□□□ -1.53
PTCD3-213ENST00000480102 PCDHA12Q9UN75 941 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 RAXQ9Y2V3 346 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 SLC4A7Q9Y6M7 1214 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 LCTP09848 1927 aa5.48□□□□□ -1.53
PTCD3-213ENST00000480102 TRIOBPQ9H2D6 2365 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms