RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 ERLIN2O94905 339 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 PAPSS2O95340 614 aaPredicted RBP12.46□□□□□ -0.41
CCDC18-208ENST00000479653 PSMC3P17980 439 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 OR1D2P34982 312 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 MPLP40238 635 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 RAP1GAPP47736 663 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 JAK3P52333 1124 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 NUCB1Q02818 461 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 FAM78AQ5JUQ0 283 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 PLA2G2CQ5R387 149 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 MAP4K3Q8IVH8 894 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 PIK3R5Q8WYR1 880 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 EDEM2Q9BV94 578 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
CCDC18-208ENST00000479653 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 COL4A3BPQ9Y5P4 624 aa12.46□□□□□ -0.41
CCDC18-208ENST00000479653 LAMA1P25391 3075 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 GAS7O60861 476 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 POU2F2P09086 479 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 PTPN2P17706 415 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 FCARP24071 287 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 AKAP5P24588 427 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 SFNP31947 248 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 KPNA1P52294 538 aaPredicted RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 NCBP1Q09161 790 aaKnown RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 CHD1LQ86WJ1 897 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 CSGALNACT1Q8TDX6 532 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 PRPF31Q8WWY3 499 aaKnown RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 JPH2Q9BR39 696 aaPredicted RBP12.45□□□□□ -0.42
CCDC18-208ENST00000479653 UNC45AQ9H3U1 944 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 TRPV5Q9NQA5 729 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 PCDHGA5Q9Y5G8 931 aa12.45□□□□□ -0.42
CCDC18-208ENST00000479653 HELZ2Q9BYK8 2649 aaKnown RBP12.44□□□□□ -0.42
CCDC18-208ENST00000479653 NRG2O14511 850 aaPredicted RBP12.44□□□□□ -0.42
CCDC18-208ENST00000479653 MSH4O15457 936 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 CEACAM1P13688 526 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 MCM5P33992 734 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 VIPR2P41587 438 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 RAB33AQ14088 237 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 VITQ6UXI7 678 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 SYNE3Q6ZMZ3 975 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 MIER3Q7Z3K6 550 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 CRYGNQ8WXF5 182 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 GJA10Q969M2 543 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 TMEM143Q96AN5 459 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 CPB2Q96IY4 423 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 CORO1BQ9BR76 489 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 PAAF1Q9BRP4 392 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 TEKT3Q9BXF9 490 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 ANKFY1Q9P2R3 1169 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 PARP2Q9UGN5 583 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
CCDC18-208ENST00000479653 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 LOC400499M0QZD8 3231 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 CASTOR2A6NHX0 329 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 SLC38A8A6NNN8 435 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 HYAL3O43820 417 aaPredicted RBP12.43□□□□□ -0.42
CCDC18-208ENST00000479653 STBD1O95210 358 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 SEC24BO95487 1268 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 LRG1P02750 347 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 HOXA6P31267 233 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 SOX9P48436 509 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 LAMTOR4Q0VGL1 99 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 DGKKQ5KSL6 1271 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 PLA2G4FQ68DD2 849 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 NOTUMQ6P988 496 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 PDZD3Q86UT5 571 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 YAF2Q8IY57 180 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 RNF149Q8NC42 400 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 GSTCDQ8NEC7 633 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 TTC8Q8TAM2 541 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 PSPC1Q8WXF1 523 aaKnown RBP12.43□□□□□ -0.42
CCDC18-208ENST00000479653 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 TCEAL4Q96EI5 215 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 ASB16Q96NS5 453 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 RIT2Q99578 217 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 LRRC2Q9BYS8 371 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 NXF3Q9H4D5 531 aaKnown RBP12.43□□□□□ -0.42
CCDC18-208ENST00000479653 BPTFQ12830 3046 aa12.43□□□□□ -0.42
CCDC18-208ENST00000479653 CNTNAP5Q8WYK1 1306 aa12.42□□□□□ -0.42
CCDC18-208ENST00000479653 hCG_1984214I3L0E3 225 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms