RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 MYH10P35580 1976 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 E2F8A0AVK6 867 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 HNRNPCP07910 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP42-206ENST00000479544 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 ITIH4Q14624 930 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 ERMARDQ5T6L9 678 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 ARMC3Q5W041 872 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 BZW1Q7L1Q6 419 aaKnown RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 SLC25A41Q8N5S1 370 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 DEPTORQ8TB45 409 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 IKZF4Q9H2S9 585 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 HEY2Q9UBP5 337 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 WDR64B1ANS9 1081 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 NOP56O00567 594 aaKnown RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 GRIN3BO60391 1043 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 ATP6V1B1P15313 513 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 COG2Q14746 738 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 SYN2Q92777 582 aaPredicted RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 IWS1Q96ST2 819 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 FAM213AQ9BRX8 229 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 TRAIPQ9BWF2 469 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 SNX3O60493 162 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 TLR2O60603 784 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 LMNAP02545 664 aaKnown RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 RALAP11233 206 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 BMP3P12645 472 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 RARGP13631 454 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 KRT4P19013 534 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 NLRP9Q7RTR0 991 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 NT5DC3Q86UY8 548 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 ATP8B4Q8TF62 1192 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 SLC5A5Q92911 643 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 GRAMD1AQ96CP6 724 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 DDX50Q9BQ39 737 aaKnown RBP14.34□□□□□ -0.11
USP42-206ENST00000479544 TAS2R14Q9NYV8 317 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 NR2E1Q9Y466 385 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 HEY1Q9Y5J3 304 aa14.34□□□□□ -0.11
USP42-206ENST00000479544 TAF1BQ53T94 588 aaPredicted RBP14.33□□□□□ -0.11
USP42-206ENST00000479544 PCDHGC5Q9Y5F6 944 aa14.33□□□□□ -0.11
USP42-206ENST00000479544 PJA2O43164 708 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 SNUPNO95149 360 aaKnown RBP14.33□□□□□ -0.12
USP42-206ENST00000479544 STAT4Q14765 748 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 AOC3Q16853 763 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 EDRF1Q3B7T1 1238 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 RCSD1Q6JBY9 416 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 CRLF3Q8IUI8 442 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 ZNF668Q96K58 619 aaPredicted RBP14.33□□□□□ -0.12
USP42-206ENST00000479544 MRPL47Q9HD33 250 aaKnown RBP14.33□□□□□ -0.12
USP42-206ENST00000479544 SLCO1B3Q9NPD5 702 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 NAALADL1Q9UQQ1 740 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 PYGMP11217 842 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 KRT10P13645 584 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 FGFR2P21802 821 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 PTENP60484 403 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 TRIML2Q8N7C3 387 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 TSSK1BQ9BXA7 367 aa14.33□□□□□ -0.12
USP42-206ENST00000479544 RIPK2O43353 540 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 CCDC22O60826 627 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 CASP5P51878 434 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 TFAMQ00059 246 aaKnown RBP14.32□□□□□ -0.12
USP42-206ENST00000479544 CYTH1Q15438 398 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 KCTD6Q8NC69 237 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 CCPG1Q9ULG6 757 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 SGPL1O95470 568 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 GH2P01242 217 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ITIH2P19823 946 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 SERPINB3P29508 390 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 SCYL1Q96KG9 808 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 RPS6KC1Q96S38 1066 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ZSWIM1Q9BR11 485 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 MTMR4Q9NYA4 1195 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 MCF2LO15068 1137 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 RTN2O75298 545 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 SETSIPP0DME0 302 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ARL4CP56559 192 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 MKRN3Q13064 507 aaKnown RBP14.32□□□□□ -0.12
USP42-206ENST00000479544 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 PCGF5Q86SE9 256 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 C3orf20Q8ND61 904 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 PIK3R5Q8WYR1 880 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 MTBPQ96DY7 904 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ACAP3Q96P50 834 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 FGFBP2Q9BYJ0 223 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 TMEM206Q9H813 350 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP42-206ENST00000479544 CD209Q9NNX6 404 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 GLI3P10071 1580 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 ZWINTO95229 277 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 GSTA1P08263 222 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 DDR1Q08345 913 aa14.32□□□□□ -0.12
USP42-206ENST00000479544 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms