RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 BRCC3P46736 316 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 CLCNKBP51801 687 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 GRIN1Q05586 938 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 SOX4Q06945 474 aaPredicted RBP19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 MTMR3Q13615 1198 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 ZNF568Q3ZCX4 644 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 C3orf58Q8NDZ4 430 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 ZNF707Q96C28 371 aaPredicted RBP19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 ACO2Q99798 780 aaKnown RBP19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 ARIH1Q9Y4X5 557 aaPredicted RBP19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 MYH15Q9Y2K3 1946 aa19.11■□□□□ 0.65
ECHDC1-216ENST00000479525 NARSO43776 548 aaKnown RBP19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 PRPHP41219 470 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 NTHL1P78549 312 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 DMP1Q13316 513 aaPredicted RBP19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 PSMD5Q16401 504 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 DCAF4L1Q3SXM0 396 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 GET4Q7L5D6 327 aaPredicted RBP19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 ZDHHC14Q8IZN3 488 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 TBC1D32Q96NH3 1257 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 MYADMQ96S97 322 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 CLSTN3Q9BQT9 956 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 UPF2Q9HAU5 1272 aaKnown RBP19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 PIDD1Q9HB75 910 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 STK39Q9UEW8 545 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 SSX2IPQ9Y2D8 614 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 KIF3AQ9Y496 699 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 COL4A3Q01955 1670 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 NOTCH4Q99466 2003 aa19.1■□□□□ 0.65
ECHDC1-216ENST00000479525 CLUHO75153 1309 aa19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 MEFVO15553 781 aaPredicted RBP19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 EFNA5P52803 228 aa19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 RILPL1Q5EBL4 403 aa19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 LARP1BQ659C4 914 aaKnown RBP19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 CD300LGQ6UXG3 332 aa19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 LNX1Q8TBB1 728 aaPredicted RBP19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 PPP1R10Q96QC0 940 aaKnown RBP19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 TTPALQ9BTX7 342 aa19.09■□□□□ 0.65
ECHDC1-216ENST00000479525 LAD1O00515 517 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 TKTP29401 623 aaKnown RBP19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 AVPR2P30518 371 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 TCF15Q12870 199 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 LILRA6Q6PI73 481 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 RSPO2Q6UXX9 243 aaPredicted RBP19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 C18orf25Q96B23 403 aaPredicted RBP19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 ACSF2Q96CM8 615 aaPredicted RBP19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 CDK5RAP3Q96JB5 506 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 ZMAT2Q96NC0 199 aaKnown RBP19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 NT5C3AQ9H0P0 336 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 ARHGAP28Q9P2N2 729 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 ANKFY1Q9P2R3 1169 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 TNFSF13BQ9Y275 285 aa19.08■□□□□ 0.65
ECHDC1-216ENST00000479525 ZMYM2Q9UBW7 1377 aa19.08■□□□□ 0.64
ECHDC1-216ENST00000479525 SMIM28A0A1B0GU29 152 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 VPS37CA5D8V6 355 aaPredicted RBP19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 ABLIM1O14639 778 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 CCL16O15467 120 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 B3GAT3O94766 335 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 PLA2G4BP0C869 781 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 MRE11P49959 708 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 SPAG1Q07617 926 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 C15orf39Q6ZRI6 1047 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 OTOP3Q7RTS5 596 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 DRC1Q96MC2 740 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 TCHPQ9BT92 498 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 MRPL4Q9BYD3 311 aaKnown RBP19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 KCNK12Q9HB15 430 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 PTPRHQ9HD43 1115 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 WDR6Q9NNW5 1121 aaKnown RBP19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 FNIP2Q9P278 1114 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 USTQ9Y2C2 406 aa19.07■□□□□ 0.64
ECHDC1-216ENST00000479525 GRM5P41594 1212 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 SLC12A3P55017 1021 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 TMEM119Q4V9L6 283 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 ARSHQ5FYA8 562 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 SPECC1Q5M775 1068 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 GRASPQ7Z6J2 395 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 PLCD3Q8N3E9 789 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 TMEM105Q8N8V8 129 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 SYT2Q8N9I0 419 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 FLCNQ8NFG4 579 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 CMASQ8NFW8 434 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 CCDC94Q9BW85 323 aaPredicted RBP19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 HAPLN2Q9GZV7 340 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 TMEM134Q9H6X4 195 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 STK24Q9Y6E0 443 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 OR1D2P34982 312 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 KARSQ15046 597 aaKnown RBP19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 HYIQ5T013 277 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 FAM173BQ6P4H8 233 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 UBALD2Q8IYN6 164 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 PIK3R5Q8WYR1 880 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 SNX27Q96L92 541 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 HCFC1R1Q9NWW0 138 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 FBXW11Q9UKB1 542 aa19.06■□□□□ 0.64
ECHDC1-216ENST00000479525 H0Y858 1186 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 ZMYND10O75800 440 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms