RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 KIAA0895Q8NCT3 520 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 RAET1EQ8TD07 263 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 ATP8B4Q8TF62 1192 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 GLG1Q92896 1179 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 CEP170P1Q96L14 293 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 BPIFA3Q9BQP9 254 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 SH2D3AQ9BRG2 576 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 TIPINQ9BVW5 301 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 GTPBP4Q9BZE4 634 aaKnown RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 UPF3AQ9H1J1 476 aaKnown RBP7.35□□□□□ -1.23
USP48-208ENST00000479177 SMARCAD1Q9H4L7 1026 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 GOLGA2P5Q9HBQ8 144 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 CBX8Q9HC52 389 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 XPNPEP1Q9NQW7 623 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 CYP26B1Q9NR63 512 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 PANK4Q9NVE7 773 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 ODF2LQ9ULJ1 636 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 PPME1Q9Y570 386 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 PCDHA2Q9Y5H9 948 aa7.35□□□□□ -1.23
USP48-208ENST00000479177 SIP14410 1827 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 SYNRGQ9UMZ2 1314 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 KAT6AQ92794 2004 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 GOLGA6L3A6NEY3 463 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 SOWAHDA6NJG2 315 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 SEPT4O43236 478 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 DYNC1LI2O43237 492 aaPredicted RBP7.34□□□□□ -1.23
USP48-208ENST00000479177 PPFIA4O75335 1185 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 F2P00734 622 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 PCSK2P16519 638 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 CCND3P30281 292 aaPredicted RBP7.34□□□□□ -1.23
USP48-208ENST00000479177 CPT1AP50416 773 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 GJA9P57773 515 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 NKX3-2P78367 333 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 STK4Q13043 487 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 EMC2Q15006 297 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 IQCB1Q15051 598 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 FSCN1Q16658 493 aaKnown RBP7.34□□□□□ -1.23
USP48-208ENST00000479177 DGKDQ16760 1214 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 MTERF2Q49AM1 385 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 XKR5Q6UX68 686 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 TRMT1LQ7Z2T5 733 aaKnown RBP7.34□□□□□ -1.23
USP48-208ENST00000479177 ADSSL1Q8N142 457 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 GJD3Q8N144 294 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 AOPEPQ8N6M6 819 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 RNF214Q8ND24 703 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 GLIS3Q8NEA6 775 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 MCPH1Q8NEM0 835 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 HPS3Q969F9 1004 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 DRC1Q96MC2 740 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 FIZ1Q96SL8 496 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 C16orf70Q9BSU1 422 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 FGFBP2Q9BYJ0 223 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 NAT10Q9H0A0 1025 aaKnown RBP7.34□□□□□ -1.23
USP48-208ENST00000479177 AP5M1Q9H0R1 490 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 DHX33Q9H6R0 707 aaKnown RBP7.34□□□□□ -1.23
USP48-208ENST00000479177 ATP6V0A4Q9HBG4 840 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 PDLIM7Q9NR12 457 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 OLFML3Q9NRN5 406 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 NRBP2Q9NSY0 501 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 ERAP1Q9NZ08 941 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 FRRS1LQ9P0K9 344 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 SEL1LQ9UBV2 794 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 TRIM33Q9UPN9 1127 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 CTNND2Q9UQB3 1225 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 TRIM17Q9Y577 477 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 COL4A3BPQ9Y5P4 624 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 PTCH2Q9Y6C5 1203 aa7.34□□□□□ -1.23
USP48-208ENST00000479177 COL1A2P08123 1366 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 MYADML2A6NDP7 307 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 IKBKBO14920 756 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 HBP1O60381 514 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 TNFRSF21O75509 655 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 GHRHP01286 108 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 RARBP10826 455 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 PLS3P13797 630 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 ERCC5P28715 1186 aaPredicted RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 GRK4P32298 578 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 PRCPP42785 496 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 CASP5P51878 434 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 BEX3Q00994 111 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 MYL5Q02045 173 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 HYAL2Q12891 473 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 PAK1Q13153 545 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 PSMD2Q13200 908 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 STIM1Q13586 685 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 BRDTQ58F21 947 aaPredicted RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 HERC4Q5GLZ8 1057 aaPredicted RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 CT47A1Q5JQC4 288 aaPredicted RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 FAM102BQ5T8I3 360 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 GDF6Q6KF10 455 aaPredicted RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 EPM2AIP1Q7L775 607 aaPredicted RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 LUZP1Q86V48 1076 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 DHX40Q8IX18 779 aaKnown RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 GUF1Q8N442 669 aaKnown RBP7.33□□□□□ -1.24
USP48-208ENST00000479177 KAT2BQ92831 832 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 KIFAP3Q92845 792 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 MED15Q96RN5 788 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
USP48-208ENST00000479177 ZHX3Q9H4I2 956 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms