RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 TMC2Q8TDI7 906 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 SEPT8Q92599 483 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 ZMAT2Q96NC0 199 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 CGRRF1Q99675 332 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 APOL6Q9BWW8 343 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 XPO4Q9C0E2 1151 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 METTL14Q9HCE5 456 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 KIAA1586Q9HCI6 787 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 ZMYND8Q9ULU4 1186 aaPredicted RBP14.24□□□□□ -0.13
CHD3-210ENST00000479080 RALGAPA2Q2PPJ7 1873 aa14.24□□□□□ -0.13
CHD3-210ENST00000479080 PTGESO14684 152 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 PARNO95453 639 aaKnown RBP14.23□□□□□ -0.13
CHD3-210ENST00000479080 NFICP08651 508 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 ACRP10323 421 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 RFC2P35250 354 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 ZNF75DP51815 510 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 ENPEPQ07075 957 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 VWA3BQ502W6 1294 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 DCAF17Q5H9S7 520 aaPredicted RBP14.23□□□□□ -0.13
CHD3-210ENST00000479080 CNKSR3Q6P9H4 555 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.23□□□□□ -0.131e-11■■■■■ 46.3
CHD3-210ENST00000479080 CXorf38Q8TB03 319 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 BADQ92934 168 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 CCDC127Q96BQ5 260 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 TMEM117Q9H0C3 514 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 MIOSQ9NXC5 875 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 KLK14Q9P0G3 267 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 CNTN3Q9P232 1028 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 MAGEC2Q9UBF1 373 aaPredicted RBP14.23□□□□□ -0.13
CHD3-210ENST00000479080 PLAGL2Q9UPG8 496 aa14.23□□□□□ -0.13
CHD3-210ENST00000479080 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 ZSCAN20P17040 1043 aaPredicted RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 KLK7P49862 253 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 MRE11P49959 708 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 GUCY2FP51841 1108 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 TPM4P67936 248 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 POU5F1Q01860 360 aaKnown RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 NCBP1Q09161 790 aaKnown RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 KCNMA1Q12791 1236 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 KCNH2Q12809 1159 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 NR1I3Q14994 352 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 NAB2Q15742 525 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 JADE1Q6IE81 842 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 CREBRFQ8IUR6 639 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 APBB2Q92870 758 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 ZFP42Q96MM3 310 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 ACAP3Q96P50 834 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 FTHL17Q9BXU8 183 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 NDST4Q9H3R1 872 aa14.22□□□□□ -0.13
CHD3-210ENST00000479080 RPF1Q9H9Y2 349 aaKnown RBP14.22□□□□□ -0.13
CHD3-210ENST00000479080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD3-210ENST00000479080 MICAL3Q7RTP6 2002 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 INPPL1O15357 1258 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 B4GALT3O60512 393 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 VNN1O95497 513 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 AFPP02771 609 aaKnown RBP14.21□□□□□ -0.13
CHD3-210ENST00000479080 C4BPAP04003 597 aaKnown RBP14.21□□□□□ -0.13
CHD3-210ENST00000479080 DLATP10515 647 aaKnown RBP14.21□□□□□ -0.13
CHD3-210ENST00000479080 GCLMP48507 274 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 FMO5P49326 533 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 GATMP50440 423 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 RAB27AP51159 221 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 UBASH3AP57075 661 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 APBA1Q02410 837 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 SOX4Q06945 474 aaPredicted RBP14.21□□□□□ -0.13
CHD3-210ENST00000479080 ZBTB6Q15916 424 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 EPC2Q52LR7 807 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 GLRA4Q5JXX5 417 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 CLLU1OSQ5K130 101 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 TDRD10Q5VZ19 366 aaKnown RBP14.21□□□□□ -0.13
CHD3-210ENST00000479080 SLC24A5Q71RS6 500 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 LMO3Q8TAP4 145 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 SEMA4DQ92854 862 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 HTATIP2Q9BUP3 242 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 TRIM6Q9C030 488 aaPredicted RBP14.21□□□□□ -0.13
CHD3-210ENST00000479080 MMRN2Q9H8L6 949 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 IL23AQ9NPF7 189 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 PARP2Q9UGN5 583 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 SIX4Q9UIU6 781 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 SIK3Q9Y2K2 1263 aa14.21□□□□□ -0.13
CHD3-210ENST00000479080 PTPRSQ13332 1948 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 EPHB6O15197 1021 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 IL18RAPO95256 599 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 SERPINC1P01008 464 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 FGFR1P11362 822 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 ITGA4P13612 1032 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 KRT13P13646 458 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 KCNE1P15382 129 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 IBSPP21815 317 aaPredicted RBP14.2□□□□□ -0.14
CHD3-210ENST00000479080 IGFBP6P24592 240 aaPredicted RBP14.2□□□□□ -0.14
CHD3-210ENST00000479080 MLH1P40692 756 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 DEFB103AP81534 67 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 KYAT1Q16773 422 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 ZACNQ401N2 412 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 TCERG1LQ5VWI1 586 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 SV2AQ7L0J3 742 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms