RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PDXDC1Q6P996 788 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 APBB1IPQ7Z5R6 666 aaPredicted RBP14.6□□□□□ -0.07
VCL-205ENST00000478896 GRASPQ7Z6J2 395 aaPredicted RBP14.6□□□□□ -0.07
VCL-205ENST00000478896 SNX27Q96L92 541 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 CLSTN3Q9BQT9 956 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 CCDC113Q9H0I3 377 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 ARHGEF3Q9NR81 526 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 ZFP37Q9Y6Q3 630 aaPredicted RBP14.6□□□□□ -0.07
VCL-205ENST00000478896 USP34Q70CQ2 3546 aa14.6□□□□□ -0.07
VCL-205ENST00000478896 DOCK6Q96HP0 2047 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 CCL16O15467 120 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 XYLBO75191 536 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 PAPLNO95428 1278 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 HNRNPA1P09651 372 aaKnown RBP eCLIP14.59□□□□□ -0.07
VCL-205ENST00000478896 HTR4Q13639 388 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
VCL-205ENST00000478896 ADSSL1Q8N142 457 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 FAM184AQ8NB25 1140 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 LNX1Q8TBB1 728 aaPredicted RBP14.59□□□□□ -0.07
VCL-205ENST00000478896 FOXP1Q9H334 677 aaPredicted RBP14.59□□□□□ -0.07
VCL-205ENST00000478896 NOL7Q9UMY1 257 aaKnown RBP14.59□□□□□ -0.07
VCL-205ENST00000478896 TRIP11Q15643 1979 aa14.59□□□□□ -0.07
VCL-205ENST00000478896 ANHXE9PGG2 379 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 B3GAT3O94766 335 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 EDN1P05305 212 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 MUTP22033 750 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 HOXA9P31269 272 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 EFNA5P52803 228 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 NTHL1P78549 312 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 ATF7IP2Q5U623 682 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 DCLRE1AQ6PJP8 1040 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 SLC7A14Q8TBB6 771 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 KCNG4Q8TDN1 519 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 KIFAP3Q92845 792 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 CXCL16Q9H2A7 254 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 BHMT2Q9H2M3 363 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 POLD4Q9HCU8 107 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 CDH7Q9ULB5 785 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 MIA3Q5JRA6 1907 aa14.58□□□□□ -0.08
VCL-205ENST00000478896 DCNP07585 359 aaKnown RBP14.57□□□□□ -0.08
VCL-205ENST00000478896 OR1D2P34982 312 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 CLCNKBP51801 687 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 YARSP54577 528 aaKnown RBP14.57□□□□□ -0.08
VCL-205ENST00000478896 HMGN5P82970 282 aaKnown RBP14.57□□□□□ -0.08
VCL-205ENST00000478896 NAB2Q15742 525 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 AXDND1Q5T1B0 1012 aaPredicted RBP14.57□□□□□ -0.08
VCL-205ENST00000478896 PARM1Q6UWI2 310 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 MTSS1LQ765P7 747 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 SNX29Q8TEQ0 813 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 FGF14Q92915 247 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 SLC2A4RGQ9NR83 387 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 PPP4R2Q9NY27 417 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 LRWD1Q9UFC0 647 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 KIAA1024Q9UPX6 916 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 SIT1Q9Y3P8 196 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 CDY1Q9Y6F8 540 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 MYO15AQ9UKN7 3530 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 PHLPP2Q6ZVD8 1323 aa14.57□□□□□ -0.08
VCL-205ENST00000478896 CCDC169A6NNP5 214 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 TMEM189-UBE2V1I3L0A0 370 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 K7ERI5 159 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 ADAM12O43184 909 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 TRAPPC3O43617 180 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
VCL-205ENST00000478896 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.082e-7■■■■□ 20.3
VCL-205ENST00000478896 DMP1Q13316 513 aaPredicted RBP14.56□□□□□ -0.08
VCL-205ENST00000478896 NBR1Q14596 966 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 ECM1Q16610 540 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 ZNF568Q3ZCX4 644 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 PHLDB3Q6NSJ2 640 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 FGF13Q92913 245 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 SHDQ96IW2 340 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 UROC1Q96N76 676 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 LLPHQ9BRT6 129 aaKnown RBP14.56□□□□□ -0.08
VCL-205ENST00000478896 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
VCL-205ENST00000478896 GOLGA2P5Q9HBQ8 144 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 TOPORSQ9NS56 1045 aaPredicted RBP14.56□□□□□ -0.08
VCL-205ENST00000478896 DDX19AQ9NUU7 478 aaKnown RBP14.56□□□□□ -0.08
VCL-205ENST00000478896 MTRRQ9UBK8 725 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 STK24Q9Y6E0 443 aa14.56□□□□□ -0.08
VCL-205ENST00000478896 CITO14578 2027 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 FGFR3P22607 806 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 TKTP29401 623 aaKnown RBP14.55□□□□□ -0.08
VCL-205ENST00000478896 PEX3P56589 373 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 OSTNP61366 133 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 GPC5P78333 572 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 RAB33AQ14088 237 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 UVSSAQ2YD98 709 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 PABPC1LQ4VXU2 614 aaKnown RBP14.55□□□□□ -0.08
VCL-205ENST00000478896 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 ZC3H14Q6PJT7 736 aaKnown RBP14.55□□□□□ -0.08
VCL-205ENST00000478896 ANKS3Q6ZW76 656 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 FBXO18Q8NFZ0 1043 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 PJA1Q8NG27 643 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 ITFG1Q8TB96 612 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 PPP1R10Q96QC0 940 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms