RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 EDRF1Q3B7T1 1238 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CERKLQ49MI3 558 aaPredicted RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 Q4G0T1 1027 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 STRIP1Q5VSL9 837 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 TMEM179Q6ZVK1 233 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 ZNF572Q7Z3I7 529 aaPredicted RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CACNA2D4Q7Z3S7 1137 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 KCNK18Q7Z418 384 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 ZAR1Q86SH2 424 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 GPBP1Q86WP2 473 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 C2CD5Q86YS7 1000 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 RNF10Q8N5U6 811 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 NOA1Q8NC60 698 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 SMG8Q8ND04 991 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 GMCL1P1Q8NEA9 526 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CAGE1Q8TC20 777 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 FAM71BQ8TC56 605 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 GPR152Q8TDT2 470 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 HPS3Q969F9 1004 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 ALS2CR12Q96Q35 445 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 AMNQ9BXJ7 453 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 IFIH1Q9BYX4 1025 aaKnown RBP5.41□□□□□ -1.54
SF3B6-202ENST00000478050 TANGO6Q9C0B7 1094 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 CALCOCO1Q9P1Z2 691 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 ARHGAP20Q9P2F6 1191 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 PI4KBQ9UBF8 816 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 SYNPO2Q9UMS6 1093 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 SNX12Q9UMY4 172 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 STXBP5LQ9Y2K9 1186 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 JRKLQ9Y4A0 524 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 HYOU1Q9Y4L1 999 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 PCDHA13Q9Y5I0 950 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 ATRNL1Q5VV63 1379 aa5.41□□□□□ -1.54
SF3B6-202ENST00000478050 WDR81Q562E7 1941 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 PIEZO1Q92508 2521 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SCN4AP35499 1836 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 MACROD2A1Z1Q3 448 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC53A6NM62 1247 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 E9PMD0 336 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 RBAK-RBAKDNI3L0D1 243 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 NFKBIEO00221 500 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ENC1O14682 589 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ZNF263O14978 683 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 CETN3O15182 167 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 GPR182O15218 404 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ENTPD3O75355 529 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SERPING1P05155 500 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SSBP05455 408 aaKnown RBP eCLIP5.4□□□□□ -1.54
SF3B6-202ENST00000478050 DRD2P14416 443 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 CYP11B2P19099 503 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ADMP35318 185 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SREBF1P36956 1147 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SLC12A3P55017 1021 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 CYP27A1Q02318 531 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ICA1Q05084 483 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 LRRC41Q15345 812 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SLC9C1Q4G0N8 1177 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 HSP90B2PQ58FF3 399 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 HERC4Q5GLZ8 1057 aaPredicted RBP5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SFMBT2Q5VUG0 894 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 STYK1Q6J9G0 422 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 TATDN1Q6P1N9 297 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 FBXO46Q6PJ61 603 aaPredicted RBP5.4□□□□□ -1.54
SF3B6-202ENST00000478050 BTNL9Q6UXG8 535 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SPOCD1Q6ZMY3 1216 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 RRAGAQ7L523 313 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ATCAYQ86WG3 371 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 TRIM59Q8IWR1 403 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 MMGT1Q8N4V1 131 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SREK1Q8WXA9 508 aaKnown RBP5.4□□□□□ -1.54
SF3B6-202ENST00000478050 CRYGNQ8WXF5 182 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 HHIPL1Q96JK4 782 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 DMRTB1Q96MA1 342 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 FAM20AQ96MK3 541 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 MMS19Q96T76 1030 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SLC38A3Q99624 504 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 MXD3Q9BW11 206 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 LSM14BQ9BX40 385 aaKnown RBP5.4□□□□□ -1.54
SF3B6-202ENST00000478050 TMPRSS13Q9BYE2 586 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 KCTD10Q9H3F6 313 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 DNAJC18Q9H819 358 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SUGCTQ9HAC7 445 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 PDE11AQ9HCR9 933 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 MED4Q9NPJ6 270 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 JADE2Q9NQC1 790 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 FAM207AQ9NSI2 230 aaPredicted RBP5.4□□□□□ -1.54
SF3B6-202ENST00000478050 HDAC6Q9UBN7 1215 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 RNF14Q9UBS8 474 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 PARP2Q9UGN5 583 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 SLC5A6Q9Y289 635 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 PCDHA2Q9Y5H9 948 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 PCDHA1Q9Y5I3 950 aa5.4□□□□□ -1.54
SF3B6-202ENST00000478050 ATP8B3O60423 1300 aa5.4□□□□□ -1.55
SF3B6-202ENST00000478050 CACNA1GO43497 2377 aa5.4□□□□□ -1.55
SF3B6-202ENST00000478050 SZT2Q5T011 3432 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 TMEM265A0A087WTH1 108 aa5.39□□□□□ -1.55
SF3B6-202ENST00000478050 A0A0U1RQG5 324 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 DDTLA6NHG4 134 aaPredicted RBP5.39□□□□□ -1.55
SF3B6-202ENST00000478050 FAM170BA6NMN3 283 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms