RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CHTF18Q8WVB6 975 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 ARPP21Q9UBL0 812 aaPredicted RBP4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 DMTF1Q9Y222 760 aa4.95□□□□□ -1.62
NCKAP1-204ENST00000477988 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 CTSSP25774 331 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 KPNA1P52294 538 aaPredicted RBP4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 CXADRP78310 365 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 OCA2Q04671 838 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 ZNF788Q6ZQV5 615 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 SPATA3Q8NHX4 192 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 ZNF480Q8WV37 535 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 FUBP3Q96I24 572 aaKnown RBP eCLIP4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 AIFM2Q9BRQ8 373 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 RNPEPQ9H4A4 650 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 PPP2R3BQ9Y5P8 575 aa4.94□□□□□ -1.62
NCKAP1-204ENST00000477988 CXorf49A8MYA2 514 aaPredicted RBP4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 PHF2O75151 1096 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 POU3F2P20265 443 aaPredicted RBP4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 MANFP55145 182 aaKnown RBP4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 OCRLQ01968 901 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 CRELD2Q6UXH1 353 aaPredicted RBP4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 FRMD7Q6ZUT3 714 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 THNSL2Q86YJ6 484 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 DRC7Q8IY82 874 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 NXPE1Q8N323 547 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 SLC35B2Q8TB61 432 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 RNF31Q96EP0 1072 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 PHACTR3Q96KR7 559 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 UROC1Q96N76 676 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 TIMP4Q99727 224 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 THG1LQ9NWX6 298 aaKnown RBP4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 FAM30AQ9NZY2 134 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 KCNE5Q9UJ90 142 aa4.93□□□□□ -1.62
NCKAP1-204ENST00000477988 TERF2Q15554 542 aa4.92□□□□□ -1.62
NCKAP1-204ENST00000477988 MED25Q71SY5 747 aa4.92□□□□□ -1.62
NCKAP1-204ENST00000477988 LNX2Q8N448 690 aa4.92□□□□□ -1.62
NCKAP1-204ENST00000477988 CDY2AQ9Y6F7 541 aa4.92□□□□□ -1.62
NCKAP1-204ENST00000477988 RPTORQ8N122 1335 aa4.92□□□□□ -1.62
NCKAP1-204ENST00000477988 ZNF891A8MT65 544 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 WT1P19544 449 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 PROK1P58294 105 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 PABPC4Q13310 644 aaKnown RBP eCLIP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 SQSTM1Q13501 440 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 TRIM25Q14258 630 aaKnown RBP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 RRP12Q5JTH9 1297 aaKnown RBP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 AKNAD1Q5T1N1 836 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 GJC2Q5T442 439 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 ZNF572Q7Z3I7 529 aaPredicted RBP4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 C8orf37Q96NL8 207 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 ANO3Q9BYT9 981 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 KCTD5Q9NXV2 234 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 PNPLA7Q6ZV29 1317 aa4.91□□□□□ -1.62
NCKAP1-204ENST00000477988 WIPF3A6NGB9 483 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 GCSHP23434 173 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 SP140Q13342 867 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 CYP2A13Q16696 494 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 COLGALT2Q8IYK4 626 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 SYNPOQ8N3V7 929 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 SMC1BQ8NDV3 1235 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 PTCD3Q96EY7 689 aaKnown RBP4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 ZSWIM1Q9BR11 485 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 ASB6Q9NWX5 421 aa4.9□□□□□ -1.63
NCKAP1-204ENST00000477988 WDR91A4D1P6 747 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 CCDC151A5D8V7 595 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 PPP1R12AO14974 1030 aaPredicted RBP4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 ORC4O43929 436 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 KPNA6O60684 536 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 GPANK1O95872 356 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 CELA2AP08217 269 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 FGFR4P22455 802 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 PTPN7P35236 360 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 NEK4P51957 841 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 VAV2P52735 878 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 MST1LQ2TV78 715 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 KLHL22Q53GT1 634 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 FOXR2Q6PJQ5 311 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 NACC2Q96BF6 587 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 UNKLQ9H9P5 680 aaKnown RBP4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 ENTPD2Q9Y5L3 495 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 ATRNL1Q5VV63 1379 aa4.89□□□□□ -1.63
NCKAP1-204ENST00000477988 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 TRIM38O00635 465 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 ALOX15P16050 662 aaPredicted RBP4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 FOLR3P41439 243 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 SOX10P56693 466 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 TRMT2AQ8IZ69 625 aaKnown RBP4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 OR7D4Q8NG98 312 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 HASPINQ8TF76 798 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 SARAFQ96BY9 339 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 ZBTB9Q96C00 473 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 ADGRE3Q9BY15 652 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
NCKAP1-204ENST00000477988 ADCY6O43306 1168 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 PEX1O43933 1283 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 KDM1AO60341 852 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 RAB11FIP3O75154 756 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 POMCP01189 267 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 GPD1P21695 349 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms