RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 CASQ2O14958 399 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 MUSKO15146 869 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 TREHO43280 583 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 FIBPO43427 364 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ATP9BO43861 1147 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 AKR1B10O60218 316 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 EFCAB14O75071 495 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 DDAH1O94760 285 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PLEKHA8P1O95397 391 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 CTSHP09668 335 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 RSPH10BP0C881 870 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ALOX15P16050 662 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 COL9A1P20849 921 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 HOXC13P31276 330 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 CSTF2P33240 577 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 THPOP40225 353 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PMS2P54278 862 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ERVK-21P61565 698 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 IKBKEQ14164 716 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 AAK1Q2M2I8 961 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PLEKHG4Q58EX7 1191 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 C10orf76Q5T2E6 689 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PCNX4Q63HM2 1172 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 FAM117BQ6P1L5 589 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PDXDC1Q6P996 788 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 USP17L6PQ6QN14 398 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 METTL7BQ6UX53 244 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 CYFIP1Q7L576 1253 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 WDR75Q8IWA0 830 aaKnown RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ZNF654Q8IZM8 581 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 GALNT15Q8N3T1 639 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 DBF4BQ8NFT6 615 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 MAP4K1Q92918 833 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ARHGEF2Q92974 986 aaKnown RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 GTF3C6Q969F1 213 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ZNF653Q96CK0 615 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ANKRD27Q96NW4 1050 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 TGS1Q96RS0 853 aaKnown RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 RAD9AQ99638 391 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 GPR20Q99678 358 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 C17orf80Q9BSJ5 609 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ZBED2Q9BTP6 218 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 SPZ1Q9BXG8 430 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 UPF3BQ9BZI7 483 aaKnown RBP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 ZWILCHQ9H900 591 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 MLXIPQ9HAP2 919 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PARVBQ9HBI1 364 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 KMT5AQ9NQR1 393 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 RTEL1Q9NZ71 1219 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 TBK1Q9UHD2 729 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 COG5Q9UP83 839 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 SPO11Q9Y5K1 396 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRA2B-211ENST00000477939 COL4A3BPQ9Y5P4 624 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 EMSYQ7Z589 1322 aa6.38□□□□□ -1.39
TRA2B-211ENST00000477939 EME2A4GXA9 379 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 E9PMD0 336 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 STXBP3O00186 592 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 PIK3CDO00329 1044 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SH2B2O14492 632 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 TCEA3O75764 348 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 RNF8O76064 485 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 EIF2S1P05198 315 aaKnown RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 ATF7P17544 494 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 RXRAP19793 462 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 OAS2P29728 719 aaKnown RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 PLA2G4AP47712 749 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 AP2B1P63010 937 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 ADAM17P78536 824 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SP4Q02446 784 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SNX1Q13596 522 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 NAA25Q14CX7 972 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 BRD3Q15059 726 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 KMT5BQ4FZB7 885 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 CFAP157Q5JU67 520 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 LRSAM1Q6UWE0 723 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 TMC6Q7Z403 805 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 PPFIBP1Q86W92 1011 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SNX32Q86XE0 403 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 LSMEM2Q8N112 164 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 CMTR1Q8N1G2 835 aaKnown RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SRBD1Q8N5C6 995 aaKnown RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 ESX1Q8N693 406 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SYT2Q8N9I0 419 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SP7Q8TDD2 431 aaPredicted RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 LMBR1Q8WVP7 490 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 HLA-CQ95604 372 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 RRP36Q96EU6 259 aaKnown RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SNF8Q96H20 258 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 SMC6Q96SB8 1091 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 TSC22D3Q99576 134 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 HERC2P3Q9BVR0 1158 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 USP26Q9BXU7 913 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 TRIM8Q9BZR9 551 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 UBXN6Q9BZV1 441 aa6.37□□□□□ -1.39
TRA2B-211ENST00000477939 LSG1Q9H089 658 aaKnown RBP6.37□□□□□ -1.39
TRA2B-211ENST00000477939 RNPEPQ9H4A4 650 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms