RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 ASB2Q96Q27 587 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 HAUS7Q99871 368 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 SLF1Q9BQI6 1058 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 TEX13BQ9BXU2 312 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 HDAC8Q9BY41 377 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 TRPV6Q9H1D0 765 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 WNT8AQ9H1J5 351 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 SLC38A10Q9HBR0 1119 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 RAVER2Q9HCJ3 691 aaKnown RBP5.47□□□□□ -1.53
CKS1B-207ENST00000477676 ZHX1Q9UKY1 873 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-207ENST00000477676 FAM184BQ9ULE4 1060 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 NLRC5Q86WI3 1866 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 SPTBN4Q9H254 2564 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 ZNF536O15090 1300 aa5.47□□□□□ -1.53
CKS1B-207ENST00000477676 A0A0U1RQG5 324 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 ATP2A1O14983 1001 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 SMARCA5O60264 1052 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 BUB1BO60566 1050 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 ATP5JP18859 108 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 KCNQ1P51787 676 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 NCKAP1LP55160 1127 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 RBM10P98175 930 aaKnown RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 PPIGQ13427 754 aaKnown RBP eCLIP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 SBK1Q52WX2 424 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 CXCL17Q6UXB2 119 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 CCDC129Q6ZRS4 1044 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 OTOP2Q7RTS6 562 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 ERC1Q8IUD2 1116 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 FTSJ3Q8IY81 847 aaKnown RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 CPXCR1Q8N123 301 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 MSL3Q8N5Y2 521 aaKnown RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 NUP133Q8WUM0 1156 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 ATXN2LQ8WWM7 1075 aaKnown RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 OSBP2Q969R2 916 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 KIF1BPQ96EK5 621 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 EAF1Q96JC9 268 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
CKS1B-207ENST00000477676 PLCD4Q9BRC7 762 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 ABHD16BQ9H3Z7 469 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 IL23AQ9NPF7 189 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 PDGFCQ9NRA1 345 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 ZBTB40Q9NUA8 1239 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 NYAP2Q9P242 653 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 THEGQ9P2T0 379 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 CNPY2Q9Y2B0 182 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 PCDHB14Q9Y5E9 798 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 DCHS1Q96JQ0 3298 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 LOXHD1Q8IVV2 1947 aa5.46□□□□□ -1.54
CKS1B-207ENST00000477676 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 A0A1W2PQJ5 194 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 M0R2C6 588 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 FOXP2O15409 715 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 SIGLEC6O43699 453 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 B4GALT4O60513 344 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 PRDM1O75626 825 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 IFIT2P09913 472 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 CCL23P55773 120 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 SNAP25P60880 206 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 PSMC6P62333 389 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 ADAM17P78536 824 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 MRPS5P82675 430 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 MUM1L1Q5H9M0 696 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 TSHZ3Q63HK5 1081 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 TAPT1Q6NXT6 567 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 TMC6Q7Z403 805 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 CLASRPQ8N2M8 674 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 PRPF38AQ8NAV1 312 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 PCSK9Q8NBP7 692 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 MKL1Q969V6 931 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 CHMP4CQ96CF2 233 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 DDX11Q96FC9 970 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 CEP95Q96GE4 821 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 SCLYQ96I15 445 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 DHRS1Q96LJ7 313 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 GLT1D1Q96MS3 346 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 UHRF1Q96T88 793 aaPredicted RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 MKRN2Q9H000 416 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 EPHX3Q9H6B9 360 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 A1CFQ9NQ94 594 aaKnown RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 INCENPQ9NQS7 918 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 CLIP2Q9UDT6 1046 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 FBXL21Q9UKT6 434 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 POLR3KQ9Y2Y1 108 aaPredicted RBP5.45□□□□□ -1.54
CKS1B-207ENST00000477676 PCDHB12Q9Y5F1 795 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 FRYLO94915 3013 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 MROH7Q68CQ1 1323 aa5.45□□□□□ -1.54
CKS1B-207ENST00000477676 CACNA1HO95180 2353 aa5.44□□□□□ -1.54
CKS1B-207ENST00000477676 ZDBF2Q9HCK1 2354 aa5.44□□□□□ -1.54
CKS1B-207ENST00000477676 PLIN4Q96Q06 1357 aa5.44□□□□□ -1.54
CKS1B-207ENST00000477676 TLR3O15455 904 aaKnown RBP5.44□□□□□ -1.54
CKS1B-207ENST00000477676 TECTAO75443 2155 aa5.44□□□□□ -1.54
CKS1B-207ENST00000477676 ATE1O95260 518 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms