RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HOXA2O43364 376 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 EXTL3O43909 919 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 EXOC3O60645 756 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 LDHAP00338 332 aaKnown RBP16.68■□□□□ 0.26
SEC13-215ENST00000477547 CLTAP09496 248 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 RPL13P26373 211 aaKnown RBP16.68■□□□□ 0.26
SEC13-215ENST00000477547 ADGRE1Q14246 886 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 HSP90AA2PQ14568 343 aaPredicted RBP16.68■□□□□ 0.26
SEC13-215ENST00000477547 CLLU1OSQ5K130 101 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 CEP135Q66GS9 1140 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 AGMOQ6ZNB7 445 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 SLC9A9Q8IVB4 645 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 HELQQ8TDG4 1101 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 TOP1MTQ969P6 601 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 SNX27Q96L92 541 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 NECAB3Q96P71 396 aaPredicted RBP16.68■□□□□ 0.26
SEC13-215ENST00000477547 RPS6KC1Q96S38 1066 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 FUCA2Q9BTY2 467 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 PBX4Q9BYU1 374 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 RNF19AQ9NV58 838 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 CPSF3Q9UKF6 684 aaKnown RBP16.68■□□□□ 0.26
SEC13-215ENST00000477547 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
SEC13-215ENST00000477547 TCF20Q9UGU0 1960 aaKnown RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 ADRB2P07550 413 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 ERCC5P28715 1186 aaPredicted RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 GATMP50440 423 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 PPP2R3AQ06190 1150 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 SNRNP35Q16560 246 aaKnown RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 ANO6Q4KMQ2 910 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 FOXR2Q6PJQ5 311 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 HERC6Q8IVU3 1022 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 BRSK2Q8IWQ3 736 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 CRIPAKQ8N1N5 446 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 ZFP42Q96MM3 310 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 RPF1Q9H9Y2 349 aaKnown RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 KIAA1586Q9HCI6 787 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 UBN1Q9NPG3 1134 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 RBAKQ9NYW8 714 aaPredicted RBP16.67■□□□□ 0.26
SEC13-215ENST00000477547 KLK14Q9P0G3 267 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 GIT1Q9Y2X7 761 aa16.67■□□□□ 0.26
SEC13-215ENST00000477547 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 GJB5O95377 273 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 PAN2Q504Q3 1202 aaKnown RBP16.66■□□□□ 0.26
SEC13-215ENST00000477547 CRELD2Q6UXH1 353 aaPredicted RBP16.66■□□□□ 0.26
SEC13-215ENST00000477547 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
SEC13-215ENST00000477547 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 PHOSPHO2Q8TCD6 241 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 URGCPQ8TCY9 931 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 YME1L1Q96TA2 773 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 GAD1Q99259 594 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 DUSP9Q99956 384 aaKnown RBP16.66■□□□□ 0.26
SEC13-215ENST00000477547 ZBED2Q9BTP6 218 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 RC3H2Q9HBD1 1191 aaKnown RBP16.66■□□□□ 0.26
SEC13-215ENST00000477547 DMAC2Q9NW81 257 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 FRMD4BQ9Y2L6 1034 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 NCOR1O75376 2440 aa16.66■□□□□ 0.26
SEC13-215ENST00000477547 COL4A4P53420 1690 aaPredicted RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 ARL5CA6NH57 179 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 ZNF233A6NK53 670 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 TBKBP1A7MCY6 615 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 CETN3O15182 167 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 DGKIO75912 1065 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 IGFBP4P22692 258 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 CASP4P49662 377 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 SCNN1GP51170 649 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 FKBP3Q00688 224 aaKnown RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 ADAM9Q13443 819 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 GLRA4Q5JXX5 417 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 LRRC43Q8N309 656 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 RDH13Q8NBN7 331 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 FAM212AQ96EL1 285 aa16.65■□□□□ 0.26
SEC13-215ENST00000477547 MRPL9Q9BYD2 267 aaKnown RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
SEC13-215ENST00000477547 REV3LO60673 3130 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 TULP1O00294 542 aaPredicted RBP16.64■□□□□ 0.25
SEC13-215ENST00000477547 INPPL1O15357 1258 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 SLC16A3O15427 465 aaKnown RBP16.64■□□□□ 0.25
SEC13-215ENST00000477547 TLL1O43897 1013 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 OFD1O75665 1012 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 AKAP3O75969 853 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 IL18RAPO95256 599 aa16.64■□□□□ 0.25
SEC13-215ENST00000477547 EPB41P11171 864 aaKnown RBP16.64■□□□□ 0.25
SEC13-215ENST00000477547 CYP24A1Q07973 514 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms