RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 MFAP3P55082 362 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 BPIFB4P59827 614 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 SP4Q02446 784 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ARHGAP1Q07960 439 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 SREBF2Q12772 1141 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 KIF22Q14807 665 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 PLCB4Q15147 1175 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 MAPK6Q16659 721 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 FAM187BQ17R55 369 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 LY6KQ17RY6 165 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 HSDL1Q3SXM5 330 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 DUSP28Q4G0W2 176 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 CBWD6Q4V339 395 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 CBWD3Q5JTY5 395 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 CBWD5Q5RIA9 395 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 TAPT1Q6NXT6 567 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 C15orf39Q6ZRI6 1047 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 APBB1IPQ7Z5R6 666 aaPredicted RBP7.21□□□□□ -1.26
LDB3-206ENST00000477489 SRGAP1Q7Z6B7 1085 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 DPP9Q86TI2 863 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 SLC35F6Q8N357 371 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ANKRD13CQ8N6S4 541 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 FBXL13Q8NEE6 735 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 LMO3Q8TAP4 145 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ASAP3Q8TDY4 903 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 LMBR1Q8WVP7 490 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 SOCS4Q8WXH5 440 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 BSNDQ8WZ55 320 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 UBXN4Q92575 508 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 RUBCNQ92622 972 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 RABGGTAQ92696 567 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 BICD1Q96G01 975 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 NT5C1BQ96P26 610 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 TINF2Q9BSI4 451 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 KATNBL1Q9H079 304 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 BCAS3Q9H6U6 928 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ZNF408Q9H9D4 720 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 EFCC1Q9HA90 598 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ARGLU1Q9NWB6 273 aaPredicted RBP7.21□□□□□ -1.26
LDB3-206ENST00000477489 DNAJC12Q9UKB3 198 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 GUCA1BQ9UMX6 200 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 PCDHGC3Q9UN70 934 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 FHOD1Q9Y613 1164 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 SAR1BQ9Y6B6 198 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 ADGRA3Q8IWK6 1321 aa7.21□□□□□ -1.26
LDB3-206ENST00000477489 TMEM150BA6NC51 233 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 LRRIQ4A6NIV6 560 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 ANKRD63C9JTQ0 380 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 ACKR2O00590 384 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 ZNF263O14978 683 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TADA3O75528 432 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 RPLP2P05387 115 aaKnown RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 GZMAP12544 262 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TBXAS1P24557 533 aaPredicted RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 MCM3P25205 808 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 HADHBP55084 474 aaKnown RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 HUNKP57058 714 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 AMPD2Q01433 879 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TNFAIP2Q03169 654 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 PTK2Q05397 1052 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 PPP3CAQ08209 521 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 NCBP1Q09161 790 aaKnown RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 CAPSQ13938 189 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 DRAP1Q14919 205 aaPredicted RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 CLUL1Q15846 466 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 C1orf220Q5T0J3 134 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 WDR78Q5VTH9 848 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 OLFML2BQ68BL8 750 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 RGMBQ6NW40 437 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 SLC39A4Q6P5W5 647 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 ALKBH5Q6P6C2 394 aaKnown RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 TSHZ1Q6ZSZ6 1077 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TAS1R3Q7RTX0 852 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TRAPPC11Q7Z392 1133 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 ZNF677Q86XU0 584 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 RASAL3Q86YV0 1011 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 CBWD2Q8IUF1 395 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 KSR1Q8IVT5 923 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 FBXO16Q8IX29 292 aaPredicted RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 SYCE1Q8N0S2 351 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 GPR161Q8N6U8 529 aaKnown RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 SLC30A5Q8TAD4 765 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TAF4BQ92750 862 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 GOLGA1Q92805 767 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 MAML3Q96JK9 1138 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 FNBP1Q96RU3 617 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 SYT11Q9BT88 431 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 TMEM117Q9H0C3 514 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 CCDC113Q9H0I3 377 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 FZD8Q9H461 694 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 PRMT7Q9NVM4 692 aaPredicted RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 NAGPAQ9UK23 515 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 AGO2Q9UKV8 859 aaKnown RBP7.2□□□□□ -1.26
LDB3-206ENST00000477489 PCDHGC5Q9Y5F6 944 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 KAT6AQ92794 2004 aa7.2□□□□□ -1.26
LDB3-206ENST00000477489 A0A087X0T9 212 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 CTAGE15A4D2H0 777 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 LRRIQ3A6PVS8 624 aaPredicted RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZBTB42B2RXF5 422 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms